Mercurial > repos > iuc > multiqc
diff test-data/quast_stats.tabular @ 8:e0f4a651c6b9 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 13875b17a3a5259b9705529a3597bea12828cb20
| author | iuc |
|---|---|
| date | Fri, 20 Apr 2018 01:06:25 -0400 |
| parents | 01237d721a9f |
| children |
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--- a/test-data/quast_stats.tabular Sun Jan 14 09:55:46 2018 -0500 +++ b/test-data/quast_stats.tabular Fri Apr 20 01:06:25 2018 -0400 @@ -1,2 +1,2 @@ -Sample # mismatches per 100 kbp # misassembled contigs Largest contig # indels per 100 kbp LG75 # local misassemblies Total length (>= 25000 bp) Total length N50 NGA50 Reference GC (%) # contigs (>= 10000 bp) LA75 NG50 # genes_partial # unaligned contigs Total length (>= 50000 bp) LA50 # contigs (>= 25000 bp) NA75 GC (%) LG50 NA50 LGA75 # contigs (>= 0 bp) Largest alignment Total length (>= 0 bp) # genes # misassemblies NGA75 Total length (>= 10000 bp) # contigs (>= 5000 bp) L75 Total length (>= 1000 bp) # unaligned contigs_partial # contigs (>= 50000 bp) Total length (>= 5000 bp) N75 # contigs (>= 1000 bp) LGA50 Duplication ratio Genome fraction (%) NG75 Unaligned length # N's per 100 kbp Misassembled contigs length Reference length L50 # contigs -14892_1#15 262.21 82.0 435484.0 33.75 106.0 132.0 17353907.0 18435361.0 115136.0 99244.0 48.21 215.0 117.0 112874.0 968.0 8.0 15112131.0 56.0 181.0 54365.0 48.17 50.0 102129.0 124.0 545.0 356982.0 18465341.0 7280.0 107.0 51757.0 17893099.0 242.0 100.0 18373173.0 59.0 123.0 18079934.0 62262.0 376.0 59.0 1.016 95.482 56990.0 88446.0 929.55 4540800.0 18916112.0 48.0 467.0 +Sample LG50 # contigs # misassemblies # local misassemblies # misassembled contigs NA50 # genes # indels per 100 kbp Reference length # contigs (>= 10000 bp) Total length (>= 1000 bp) GC (%) Reference GC (%) Unaligned length Misassembled contigs length Genome fraction (%) Largest alignment L75 NG75 # contigs (>= 1000 bp) Largest contig N75 NGA50 NA75 LA50 LGA75 Total length LG75 Total length (>= 50000 bp) # contigs (>= 50000 bp) # mismatches per 100 kbp Total length (>= 25000 bp) Total length (>= 10000 bp) Total length (>= 5000 bp) Total length (>= 0 bp) # unaligned contigs_partial # contigs (>= 25000 bp) LA75 # contigs (>= 0 bp) N50 LGA50 # genes_partial NGA75 # contigs (>= 5000 bp) Duplication ratio NG50 # unaligned contigs # N's per 100 kbp L50 +14892_1#15 50.0 467.0 107.0 132.0 82.0 102129.0 7280.0 33.75 18916112.0 215.0 18373173.0 48.17 48.21 88446.0 4540800.0 95.482 356982.0 100.0 56990.0 376.0 435484.0 62262.0 99244.0 54365.0 56.0 124.0 18435361.0 106.0 15112131.0 123.0 262.21 17353907.0 17893099.0 18079934.0 18465341.0 59.0 181.0 117.0 545.0 115136.0 59.0 968.0 51757.0 242.0 1.016 112874.0 8.0 929.55 48.0