Mercurial > repos > iuc > multiqc
view test-data/flexbar.txt @ 0:3bad335ccea9 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
| author | iuc |
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| date | Tue, 24 Oct 2017 06:29:59 -0400 |
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________ __ / ____/ /__ _ __/ /_ ____ ______ / /_ / / _ \| |/ / __ \/ __ `/ ___/ / __/ / / __/> </ /_/ / /_/ / / /_/ /_/\___/_/|_/_.___/\__._/_/ Flexbar - flexible barcode and adapter removal, version 3.0 Developed with SeqAn, the library for sequence analysis Available on github.com/seqan/flexbar Local time: Mon Jun 5 13:20:34 2017 Number of threads: 1 Bundled fragments: 256 Target name: result_right File type: fasta Reads file: reads.fasta Adapter file: adapters.fasta max-uncalled: 0 min-read-length: 10 adapter-trim-end: RIGHT adapter-min-overlap: 4 adapter-error-rate: 0.1 adapter-match: 1 adapter-mismatch: -1 adapter-gap: -6 Adapter: Sequence: ad1 CGTCTT Processing reads ...done. Elapsed time: < 1 sec Adapter removal statistics ========================== Adapter: Overlap removal: Full length: ad1 11 10 Min, max, mean and median overlap: 5 / 6 / 5 / 6 Output file statistics ====================== Read file: result_right.fasta written reads 10 short reads 3 Filtering statistics ==================== Processed reads 13 skipped due to uncalled bases 0 short prior to adapter removal 0 finally skipped short reads 3 Discarded reads overall 3 Remaining reads 10 (76%) Processed bases 422 Remaining bases 231 (54% of input) Flexbar completed adapter removal.