view test-data/samtools_flagstat_stats.tabular @ 10:ce0f144f4835 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit e22f6c00774c9ec9f29773eba43fd509d55031e4
author iuc
date Sun, 05 Aug 2018 18:26:28 -0400
parents e0f4a651c6b9
children
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Sample	read2_passed	mapped_failed_pct	with mate mapped to a different chr (mapQ >= 5)_passed	properly paired_passed	read1_passed	total_passed	supplementary_failed	duplicates_failed	singletons_failed	mapped_passed_pct	secondary_passed	properly paired_passed_pct	properly paired_failed_pct	singletons_passed	with mate mapped to a different chr (mapQ >= 5)_failed	supplementary_passed	duplicates_passed	flagstat_total	mapped_passed	with mate mapped to a different chr_failed	secondary_failed	properly paired_failed	with itself and mate mapped_failed	with mate mapped to a different chr_passed	paired in sequencing_failed	with itself and mate mapped_passed	singletons_passed_pct	total_failed	paired in sequencing_passed	read1_failed	mapped_failed	read2_failed	singletons_failed_pct
samtools_flagstat	0	nan	0	0	0	21040602	0	0	0	98.33	0	nan	nan	0	0	0	5448463	21040602	20689039	0	0	0	0	0	0	0	nan	0	0	0	0	0	nan