Mercurial > repos > iuc > mummer_mummer

comparison mummer.xml @ 4:bcd65de9725b draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mummer4 commit bacb32814054404587451948b3a6682cf0d1a33a"
author iuc
date Sat, 27 Nov 2021 09:59:44 +0000
parents 48823c9635a4
children 57f042937ba7
comparison
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3:48823c9635a4 4:bcd65de9725b
1 <tool id="mummer_mummer" name="Mummer" version="@MUMMER_VERSION@@WRAPPER_VERSION@"> 1 <tool id="mummer_mummer" name="Mummer" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
2 <description>Align two or more sequences</description> 2 <description>Align two or more sequences</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="bio_tools"/>
6 <expand macro="requirements"> 7 <expand macro="requirements">
7 <expand macro="gnuplot_requirement"/> 8 <expand macro="gnuplot_requirement"/>
8 </expand> 9 </expand>
9 <command detect_errors="exit_code"> 10 <command detect_errors="exit_code">
10 <![CDATA[ 11 <![CDATA[
112 </outputs> 113 </outputs>
113 <tests> 114 <tests>
114 <test> 115 <test>
115 <param name="reference_sequence" ftype="fasta" value="human_aqp3.fasta" /> 116 <param name="reference_sequence" ftype="fasta" value="human_aqp3.fasta" />
116 <param name="query_sequence" ftype="fasta" value="mouse_aqp3.fasta" /> 117 <param name="query_sequence" ftype="fasta" value="mouse_aqp3.fasta" />
117 <param name="options" value="defaults" /> 118 <param name="options|advanced" value="defaults" />
118 <param name="plot" value="yes" /> 119 <param name="plot" value="yes" />
119 <output name="output" ftype="tabular" compare="diff" value="mummer.txt" /> 120 <output name="output" ftype="tabular" compare="diff" value="mummer.txt" />
120 <output name="png_output" ftype="png" compare="sim_size" value="plot.png" /> 121 <output name="png_output" ftype="png" compare="sim_size" value="plot.png" />
121 </test> 122 </test>
122 </tests> 123 </tests>