Mercurial > repos > iuc > mummer_nucmer

diff nucmer.xml @ 1:5b0b49b5421c draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mummer4 commit 96608e94742d17cb73d57201099ff5f5abbef276"
author iuc
date Fri, 24 Jan 2020 15:56:52 -0500
parents a18fb4f826fc
children e18267f90096
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line diff
--- a/nucmer.xml	Wed Dec 05 02:37:36 2018 -0500
+++ b/nucmer.xml	Fri Jan 24 15:56:52 2020 -0500
@@ -1,10 +1,10 @@
-<tool id="mummer_nucmer" name="Nucmer" version="@MUMMER_VERSION@">
+<tool id="mummer_nucmer" name="Nucmer" version="@MUMMER_VERSION@@WRAPPER_VERSION@">
     <description>Align two or more sequences</description>
     <macros>
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements">
-        <requirement type="package" version="5.2.3">gnuplot</requirement>
+        <expand macro="gnuplot_requirement"/>
     </expand>
     <command detect_errors="exit_code">
         <![CDATA[
@@ -56,8 +56,9 @@
                         -y [$mumplot.range.min_y:$mumplot.range.max_y]
                     #end if
                     'out.delta'
+                    @MUMMER_GNUPLOT_MANUAL@
             #end if
-        ]]>   	
+        ]]>
     </command> 
     <inputs>
         <param name="reference_sequence" type="data" format="fasta" label="Reference Sequence" help="FastA or multi-FastA" />