Mercurial > repos > iuc > nanoplot
comparison nanoplot.xml @ 1:4c172a4a4c9e draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 16878097949f0af33d825e62b20b789a7f8ad319
author | iuc |
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date | Tue, 23 Oct 2018 08:30:58 -0400 |
parents | db1eeffba23e |
children | acd337269171 |
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0:db1eeffba23e | 1:4c172a4a4c9e |
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15 ln -s '$f' './read_${i}.$extension' && | 15 ln -s '$f' './read_${i}.$extension' && |
16 $reads_temp.append("read_" + str($i) + "." + str($extension)) | 16 $reads_temp.append("read_" + str($i) + "." + str($extension)) |
17 #end for | 17 #end for |
18 | 18 |
19 NanoPlot | 19 NanoPlot |
20 --threads \${GALAXY_SLOTS:-4} | |
20 --$reads.type ${' '.join($reads_temp)} | 21 --$reads.type ${' '.join($reads_temp)} |
21 | 22 |
22 #if $filter.maxlength | 23 #if $filter.maxlength |
23 --maxlength $filter.maxlength | 24 --maxlength $filter.maxlength |
24 #end if | 25 #end if |