Mercurial > repos > iuc > nanoplot
view test-data/NanoStats.txt @ 0:db1eeffba23e draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit ad3c2e459ae53ab61df3d967d755fd0b42149328
author | iuc |
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date | Fri, 28 Sep 2018 19:30:29 -0400 |
parents | |
children | acd337269171 |
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General summary: Active channels: 169 Mean read length: 23212.6 Mean read quality: 10.1 Median read length: 9390.0 Median read quality: 10.3 Number of reads: 371 Read length N50: 60395 Total bases: 8611871 Number, percentage and megabases of reads above quality cutoffs >Q5: 371 (100.0%) 8.6Mb >Q7: 371 (100.0%) 8.6Mb >Q10: 207 (55.8%) 4.7Mb >Q12: 49 (13.2%) 0.9Mb >Q15: 0 (0.0%) 0.0Mb Top 5 highest mean basecall quality scores and their read lengths 1: 13.3 (6333) 2: 13.1 (5448) 3: 12.9 (27834) 4: 12.8 (20351) 5: 12.8 (97730) Top 5 longest reads and their mean basecall quality score 1: 393431 (10.6) 2: 341725 (11.8) 3: 320662 (8.0) 4: 226843 (9.1) 5: 221901 (10.0)