Mercurial > repos > iuc > ncbi_datasets

comparison macros.xml @ 15:198c75abbf55 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_datasets commit 1b6341a0430757c07760af2115ae4d5e70f5903a
author iuc
date Mon, 04 Mar 2024 17:27:59 +0000
parents 75acf92c8fd5
children a6a475ed58cb
comparison
equal deleted inserted replaced
14:75acf92c8fd5 15:198c75abbf55
1 <macros> 1 <macros>
2 <token name="@TOOL_VERSION@">15.19.1</token> 2 <token name="@TOOL_VERSION@">16.6.0</token>
3 <token name="@VERSION_SUFFIX@">0</token> 3 <token name="@VERSION_SUFFIX@">0</token>
4 <token name="@PROFILE@">22.05</token> 4 <token name="@PROFILE@">22.05</token>
5 <token name="@LICENSE@">MIT</token> 5 <token name="@LICENSE@">MIT</token>
6 <token name="@PROFILE_AND_LICENSE@">profile="@PROFILE@" license="@LICENSE@"</token> 6 <token name="@PROFILE_AND_LICENSE@">profile="@PROFILE@" license="@LICENSE@"</token>
7 <token name="@SETUP_CERTIFICATES@"><![CDATA[ 7 <token name="@SETUP_CERTIFICATES@"><![CDATA[
8 ## If running in container use certificate from ca-certificates instead of outdated / missing container certificates 8 ## If running in a container use certificates from ca-certificates instead of outdated/missing container certificates
9 [ -f /usr/local/ssl/cacert.pem ] && export SSL_CERT_FILE="/usr/local/ssl/cacert.pem"; 9 [ -f /usr/local/ssl/cacert.pem ] && export SSL_CERT_FILE="/usr/local/ssl/cacert.pem";
10 ]]></token> 10 ]]></token>
11 <xml name="requirements"> 11 <xml name="requirements">
12 <requirements> 12 <requirements>
13 <requirement type="package" version="@TOOL_VERSION@">ncbi-datasets-cli</requirement> 13 <requirement type="package" version="@TOOL_VERSION@">ncbi-datasets-cli</requirement>
14 <requirement type="package" version="2023.7.22">ca-certificates</requirement> 14 <requirement type="package" version="2024.2.2">ca-certificates</requirement>
15 <requirement type="package" version="16.02">p7zip</requirement> 15 <requirement type="package" version="16.02">p7zip</requirement>
16 </requirements> 16 </requirements>
17 </xml> 17 </xml>
18 <xml name="bio_tools"> 18 <xml name="bio_tools">
19 <xrefs> 19 <xrefs>
69 </sanitizer> 69 </sanitizer>
70 </param> 70 </param>
71 </xml> 71 </xml>
72 72
73 <xml name="taxon_positional"> 73 <xml name="taxon_positional">
74 <param name="taxon_positional" type="text" label="Enter taxon" help="e.g. human, mouse, bos taurus, etc."/> 74 <param name="taxon_positional" type="text" label="Enter taxon" help="e.g. human, mouse, bos taurus, etc. or use Taxonomy ID from NCBI for greater accuracy, use species-level only not genera or larger taxa"/>
75 </xml> 75 </xml>
76 76
77 <xml name="ortholog"> 77 <xml name="ortholog">
78 <param argument="--ortholog" type="text" label="Retrieve orthologs for taxa" help="Retrieve data for an ortholog set. Provide one or more comma separated taxa (any rank) to filter results or 'all' for the complete set."> 78 <param argument="--ortholog" type="text" label="Retrieve orthologs for taxa" help="Retrieve data for an ortholog set. Provide one or more comma separated taxa (any rank) to filter results or 'all' for the complete set.">
79 <sanitizer invalid_char=""> 79 <sanitizer invalid_char="">