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comparison macros.xml @ 12:d78faac2c6ef draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_datasets commit affffdbe7237a2c0ba5793c0e7dd11cebb8413a9
author iuc
date Sat, 03 Dec 2022 13:29:32 +0000
parents ac24fff14f23
children 1e188c9610c3
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equal deleted inserted replaced
11:ac24fff14f23 12:d78faac2c6ef
1 <macros> 1 <macros>
2 <token name="@TOOL_VERSION@">14.4</token> 2 <token name="@TOOL_VERSION@">14.4</token>
3 <token name="@VERSION_SUFFIX@">0</token> 3 <token name="@VERSION_SUFFIX@">1</token>
4 <token name="@PROFILE@">21.01</token> 4 <token name="@PROFILE@">21.01</token>
5 <token name="@LICENSE@">MIT</token> 5 <token name="@LICENSE@">MIT</token>
6 <token name="@PROFILE_AND_LICENSE@">profile="@PROFILE@" license="@LICENSE@"</token> 6 <token name="@PROFILE_AND_LICENSE@">profile="@PROFILE@" license="@LICENSE@"</token>
7 <token name="@SETUP_CERTIFICATES@"><![CDATA[ 7 <token name="@SETUP_CERTIFICATES@"><![CDATA[
8 ## If running in container use certificate from ca-certificates instead of outdated / missing container certificates 8 ## If running in container use certificate from ca-certificates instead of outdated / missing container certificates
13 <requirement type="package" version="@TOOL_VERSION@">ncbi-datasets-cli</requirement> 13 <requirement type="package" version="@TOOL_VERSION@">ncbi-datasets-cli</requirement>
14 <requirement type="package" version="2022.9.24">ca-certificates</requirement> 14 <requirement type="package" version="2022.9.24">ca-certificates</requirement>
15 <requirement type="package" version="16.02">p7zip</requirement> 15 <requirement type="package" version="16.02">p7zip</requirement>
16 </requirements> 16 </requirements>
17 </xml> 17 </xml>
18 <xml name="bio_tools">
19 <xrefs>
20 <xref type="bio.tools">ncbi_datasets</xref>
21 </xrefs>
22 </xml>
23 <xml name="version_command"><![CDATA[
24 datasets --version | cut -d" " -f 3
25 ]]></xml>
18 <xml name="annotation"> 26 <xml name="annotation">
19 <param argument="--annotated" type="boolean" truevalue="--annotated" falsevalue="" label="Only include genomes with annotation ?"/> 27 <param argument="--annotated" type="boolean" truevalue="--annotated" falsevalue="" label="Only include genomes with annotation ?"/>
20 </xml> 28 </xml>
21 <xml name="assembly_level"> 29 <xml name="assembly_level">
22 <param argument="--assembly-level" type="select" label="Restrict assemblies to a comma-separated list of one or more of these" multiple="true" optional="true"> 30 <param argument="--assembly-level" type="select" label="Restrict assemblies to a comma-separated list of one or more of these" multiple="true" optional="true">