Mercurial > repos > iuc > ncbi_eutils_ecitmatch
comparison macros.xml @ 1:732a52c18758 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit a4b0969b33a68a0ea9ba12291f6694aec24f13ed
author | iuc |
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date | Tue, 30 Oct 2018 19:11:26 -0400 |
parents | 68cd8d564e0a |
children | 1dff3adb0a97 |
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0:68cd8d564e0a | 1:732a52c18758 |
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1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
2 <macros> | 2 <macros> |
3 <token name="@WRAPPER_VERSION@">1.1</token> | 3 <token name="@WRAPPER_VERSION@">1.2</token> |
4 <token name="@EMAIL_ARGUMENTS@"> | 4 <token name="@EMAIL_ARGUMENTS@"> |
5 --user_email "$__user_email__" | 5 --user_email "$__user_email__" |
6 #set admin_emails = ';'.join(str($__admin_users__).split(',')) | 6 #set admin_emails = ';'.join(str($__admin_users__).split(',')) |
7 --admin_email "$admin_emails" | 7 --admin_email "$admin_emails" |
8 </token> | 8 </token> |
48 laws requires the written permission of the copyright owners. NLM | 48 laws requires the written permission of the copyright owners. NLM |
49 provides no legal advice concerning distribution of copyrighted | 49 provides no legal advice concerning distribution of copyrighted |
50 materials. Please consult your legal counsel. If you wish to do a large | 50 materials. Please consult your legal counsel. If you wish to do a large |
51 data mining project on PubMed data, you can enter into a licensing | 51 data mining project on PubMed data, you can enter into a licensing |
52 agreement and lease the data for free from NLM. For more information on | 52 agreement and lease the data for free from NLM. For more information on |
53 this please see `http://www.nlm.nih.gov/databases/leased.html <http://www.nlm.nih.gov/databases/leased.html>`__ | 53 this please see `https://www.nlm.nih.gov/databases/download/data_distrib_main.html <https://www.nlm.nih.gov/databases/download/data_distrib_main.html>`__ |
54 | 54 |
55 The `full disclaimer <http://www.ncbi.nlm.nih.gov/About/disclaimer.html>`__ is available on | 55 The `full disclaimer <https://www.ncbi.nlm.nih.gov/home/about/policies/>`__ is available on |
56 their website | 56 their website |
57 | 57 |
58 Liability | 58 Liability |
59 ~~~~~~~~~ | 59 ~~~~~~~~~ |
60 | 60 |
827 <citation type="bibtex">@Book{ncbiEutils, | 827 <citation type="bibtex">@Book{ncbiEutils, |
828 author = {Eric Sayers}, | 828 author = {Eric Sayers}, |
829 title = {Entrez Programming Utilities Help}, | 829 title = {Entrez Programming Utilities Help}, |
830 year = {2010}, | 830 year = {2010}, |
831 publisher = {National Center for Biotechnology Information, Bethesda, Maryland}, | 831 publisher = {National Center for Biotechnology Information, Bethesda, Maryland}, |
832 note = {http://ww.ncbi.nlm.nih.gov/books/NBK25500/} | 832 note = {https://www.ncbi.nlm.nih.gov/books/NBK25500/} |
833 }</citation> | 833 }</citation> |
834 </citations> | 834 </citations> |
835 </xml> | 835 </xml> |
836 <xml name="requirements"> | 836 <xml name="requirements"> |
837 <requirements> | 837 <requirements> |
838 <requirement type="package" version="2.7">python</requirement> | 838 <requirement type="package" version="1.68">biopython</requirement> |
839 <requirement type="package" version="1.66">biopython</requirement> | 839 <requirement type="package" version="1.10">six</requirement> |
840 </requirements> | 840 </requirements> |
841 </xml> | 841 </xml> |
842 <xml name="linkname"> | 842 <xml name="linkname"> |
843 <param name="linkname" type="select" label="To NCBI Database"> | 843 <param name="linkname" type="select" label="To NCBI Database"> |
844 <!-- TODO: http://eutils.ncbi.nlm.nih.gov/entrez/query/static/entrezlinks.html --> | 844 <!-- TODO: https://eutils.ncbi.nlm.nih.gov/entrez/query/static/entrezlinks.html --> |
845 </param> | 845 </param> |
846 </xml> | 846 </xml> |
847 </macros> | 847 </macros> |