Mercurial > repos > iuc > ncbi_eutils_egquery
view README.rst @ 5:0c63519ae4e0 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit dd9b889d83f058d2ddb87a4e7709ee3d93dddd69"
author | iuc |
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date | Fri, 27 Aug 2021 11:29:47 +0000 |
parents | 9d18e6815994 |
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Galaxy NCBI Entrez Tools ======================== This repo requires a readme as administrators should very aware of some restrictions NCBI places on the use of the Entrez service. NCBI requests that you please limit large jobs to either weekends or between 9:00 PM and 5:00 AM Eastern time during weekdays. This is not a request that the Galaxy tool can easily service, so we've included it in the disclaimer on every tool quite prominently. Failure to comply with NCBI's policies may result in an block until you/the user contacts NCBI and registers the tool ID and their email. Note that these are *IP* level blocks so the Galaxy tools uses a concatenation of the administrator's emails, and the user email, in hopes that NCBI will contact all relevant parties should their system be abused. Additionally, since these are IP level blocks, the Galaxy tool author (@erasche) recommends using the following ``jobs_conf.xml`` snippet in order to place a system-wide restriction of 1 concurrent Entrez job amongst all users. .. code:: xml <destination id="entrez" runner="local"> </destination> <limit type="concurrent_jobs" id="entrez">1</limit> <tools> <tool id="ncbi.eutils.efetch" destination="entrez" /> <tool id="ncbi.eutils.esearch" destination="entrez" /> <tool id="ncbi.eutils.epost" destination="entrez" /> <tool id="ncbi.eutils.elink" destination="entrez" /> <tool id="ncbi.eutils.einfo" destination="entrez" /> <tool id="ncbi.eutils.esummary" destination="entrez" /> </tools>