Mercurial > repos > iuc > ncbi_eutils_einfo
comparison einfo.xml @ 0:32ac58827a97 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit 15bcc5104c577b4b9c761f2854fc686c07ffa9db
| author | iuc |
|---|---|
| date | Thu, 07 Jul 2016 02:40:06 -0400 |
| parents | |
| children | f6007bce569d |
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| -1:000000000000 | 0:32ac58827a97 |
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| 1 <?xml version="1.0"?> | |
| 2 <tool id="ncbi_eutils_einfo" name="NCBI EInfo" version="@WRAPPER_VERSION@"> | |
| 3 <description>fetch NCBI database metadata</description> | |
| 4 <macros> | |
| 5 <import>macros.xml</import> | |
| 6 </macros> | |
| 7 <expand macro="requirements"/> | |
| 8 <version_command>python einfo.py --version</version_command> | |
| 9 <command detect_errors="aggressive" interpreter="python"><![CDATA[einfo.py | |
| 10 --db $db_select | |
| 11 | |
| 12 @EMAIL_ARGUMENTS@ | |
| 13 > $default]]></command> | |
| 14 <inputs> | |
| 15 <expand macro="dbselect"/> | |
| 16 </inputs> | |
| 17 <outputs> | |
| 18 <data format="xml" name="default" label="NCBI Database Information: $db_select"/> | |
| 19 </outputs> | |
| 20 <tests> | |
| 21 <test> | |
| 22 <param name="db_select" value="pubmed"/> | |
| 23 <output name="default" file="pubmed.metadata.xml" compare="contains" ftype="xml"/> | |
| 24 </test> | |
| 25 </tests> | |
| 26 <help><![CDATA[ | |
| 27 NCBI Entrez EInfo | |
| 28 ================= | |
| 29 | |
| 30 Provides the number of records indexed in each field of a given database, the | |
| 31 date of the last update of the database, and the available links from the | |
| 32 database to other Entrez databases. | |
| 33 | |
| 34 @REFERENCES@ | |
| 35 | |
| 36 @DISCLAIMER@ | |
| 37 ]]></help> | |
| 38 <expand macro="citations"/> | |
| 39 </tool> |