Mercurial > repos > iuc > ncbi_eutils_elink
diff egquery.py @ 9:bb5af69cf3f7 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit 851b88d92fa7740880a5edf407f629bf3f7f7bf0
| author | iuc |
|---|---|
| date | Fri, 04 Oct 2024 14:35:37 +0000 |
| parents | c75419361087 |
| children |
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--- a/egquery.py Mon Jan 23 10:37:25 2023 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,25 +0,0 @@ -#!/usr/bin/env python - -import argparse - -import eutils - - -if __name__ == '__main__': - parser = argparse.ArgumentParser(description='EGQuery', epilog='') - parser.add_argument('term', help='Query') - - parser.add_argument('--user_email', help="User email") - parser.add_argument('--admin_email', help="Admin email") - - parser.add_argument('--version', action='version', version=eutils.Client.getVersion(), help='Version (reports Biopython version)') - - args = parser.parse_args() - - c = eutils.Client(user_email=args.user_email, admin_email=args.admin_email) - - payload = { - 'term': args.term, - } - results = c.gquery(**payload) - print(results)