Mercurial > repos > iuc > ncbi_eutils_epost

comparison epost.xml @ 0:18e6b25259ff draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit 15bcc5104c577b4b9c761f2854fc686c07ffa9db
author iuc
date Thu, 07 Jul 2016 02:40:33 -0400
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children 7d868844e952
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-1:000000000000 0:18e6b25259ff
1 <?xml version="1.0"?>
2 <tool id="ncbi_eutils_epost" name="NCBI EPost" version="@WRAPPER_VERSION@">
3 <description>post UIDs to NCBI History Server</description>
4 <macros>
5 <import>macros.xml</import>
6 </macros>
7 <expand macro="requirements"/>
8 <version_command>python epost.py --version</version_command>
9 <command detect_errors="aggressive" interpreter="python"><![CDATA[epost.py
10 $db_select
11
12 @EMAIL_ARGUMENTS@
13
14 @LIST_OR_HIST@
15
16 > $history
17 ]]></command>
18 <inputs>
19 <expand macro="dbselect"/>
20 <expand macro="list_or_hist"/>
21 </inputs>
22 <outputs>
23 <expand macro="history_out"/>
24 </outputs>
25 <tests>
26 <test>
27 <param name="db_select" value="nuccore"/>
28 <param name="qss" value="id_list"/>
29 <param name="id_list" value="126697566"/>
30 <output name="history" file="example.history.json" compare="sim_size" delta="10" ftype="json"/>
31 </test>
32 </tests>
33 <help><![CDATA[
34 NCBI Entrez EPost
35 =================
36
37 Accepts a list of UIDs from a given database, stores the set on the History
38 Server, and responds with an NCBI History reference.
39
40 @REFERENCES@
41
42 @DISCLAIMER@
43 ]]></help>
44 <expand macro="citations"/>
45 </tool>