view epost.xml @ 1:196b8dd07896 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit a4b0969b33a68a0ea9ba12291f6694aec24f13ed
author iuc
date Tue, 30 Oct 2018 19:10:51 -0400
parents 18e6b25259ff
children 7d868844e952
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<?xml version="1.0"?>
<tool id="ncbi_eutils_epost" name="NCBI EPost" version="@WRAPPER_VERSION@">
  <description>post UIDs to NCBI History Server</description>
  <macros>
    <import>macros.xml</import>
  </macros>
  <expand macro="requirements"/>
  <version_command>python epost.py --version</version_command>
  <command detect_errors="aggressive" interpreter="python"><![CDATA[epost.py
$db_select

@EMAIL_ARGUMENTS@

@LIST_OR_HIST@

> $history
]]></command>
  <inputs>
    <expand macro="dbselect"/>
    <expand macro="list_or_hist"/>
  </inputs>
  <outputs>
    <expand macro="history_out"/>
  </outputs>
  <tests>
    <test>
      <param name="db_select" value="nuccore"/>
      <param name="qss" value="id_list"/>
      <param name="id_list" value="126697566"/>
      <output name="history" file="example.history.json" compare="sim_size" delta="10" ftype="json"/>
    </test>
  </tests>
  <help><![CDATA[
NCBI Entrez EPost
=================

Accepts a list of UIDs from a given database, stores the set on the History
Server, and responds with an NCBI History reference.

@REFERENCES@

@DISCLAIMER@
      ]]></help>
  <expand macro="citations"/>
</tool>