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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/ncbi_fcs_gx commit 4a6561ed00e004260be3f3c29d81e814c60e20af
author iuc
date Fri, 12 Jan 2024 22:11:39 +0000
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##[["GX taxonomy analysis report", 3, 1], {"git-rev": "+branch--", "run-date": "Wed Jan 10 08:58:52 2024", "db": {"build-date": "2022-11-03", "seqs": 3042, "Gbp": 0.28336}, "run-info": {"agg-cvg": 0.358706, "asserted-div": "anml:insects", "inferred-primary-divs": ["prok:CFB group bacteria"], "corrected-primary-divs": ["anml:insects"]}}]
#seq-id	seq-len	(xp,lc,co,n,xc)-len	cvg-by-all	sep1	tax-name-1	tax-id-1	div-1	cvg-by-div-1	cvg-by-tax-1	score-1	sep2	tax-id-2	div-2	cvg-by-div-2	cvg-by-tax-2	score-2	sep3	tax-id-3	div-3	cvg-by-div-3	cvg-by-tax-3	score-3	sep4	tax-id-4	div-4	cvg-by-div-4	cvg-by-tax-4	score-4	sep5	reserved	result	div	div_pct_cvg
JPZV02005859.1	705930	0,1139,0,0,0	159470	|	Bacteroides xylanisolvens	371601	prok:CFB group bacteria	159470	49227	393	|	1796613	prok:CFB group bacteria	159470	48051	387	|						|						|	n/a	low-coverage	prok:CFB group bacteria	23
JPZV02009577.1	600722	0,65,0,0,0	316464	|	Bacteroides caecimuris	1796613	prok:CFB group bacteria	316464	137645	782	|	371601	prok:CFB group bacteria	316464	120328	757	|						|						|	n/a	contaminant(div)	prok:CFB group bacteria	53
JPZV02016362.1	432265	0,0,0,0,0	197253	|	Bacteroides salyersiae	291644	prok:CFB group bacteria	197253	74527	520	|	246787	prok:CFB group bacteria	197253	74971	512	|						|						|	n/a	contaminant(div)	prok:CFB group bacteria	46
JPZV02031416.1	170387	0,60,0,0,0	32395	|	Bacteroides sp. CBA7301	2715212	prok:CFB group bacteria	32395	13706	205	|	1297750	prok:CFB group bacteria	32395	12253	201	|						|						|	n/a	low-coverage	prok:CFB group bacteria	19
JPZV02034235.1	131158	0,0,0,0,0	33221	|	Bacteroides faecichinchillae	871325	prok:CFB group bacteria	33221	17243	230	|	1121098	prok:CFB group bacteria	33221	15138	222	|						|						|	n/a	low-coverage	prok:CFB group bacteria	25
JPZV02046037.1	26753	0,0,0,0,0	2720	|	Bacteroides graminisolvens DSM 19988 = JCM 15093	1121097	prok:CFB group bacteria	2720	912	45	|	28111	prok:CFB group bacteria	2720	821	45	|						|						|	n/a	low-coverage	prok:CFB group bacteria	10