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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nextclade commit e72bef3964ce9d0c52ef2713d177684dfbee4cfb
author iuc
date Wed, 31 Aug 2022 16:40:29 +0000
parents 07ab9bd68a02
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# Gene map (genome annotation) of SARS-CoV-2 in GFF format.
# For gene map purpses we only need some of the columns. We substitute unused values with "." as per GFF spec.
# See GFF format reference at https://www.ensembl.org/info/website/upload/gff.html
# seqname	source	feature	start	end	score	strand	frame	attribute
.	.	gene	26245	26472	.	+	.	 gene_name=E
.	.	gene	26523	27191	.	+	.	 gene_name=M
.	.	gene	28274	29533	.	+	.	 gene_name=N
.	.	gene	266	13468	.	+	.	 gene_name=ORF1a
.	.	gene	13468	21555	.	+	.	 gene_name=ORF1b
.	.	gene	25393	26220	.	+	.	 gene_name=ORF3a
.	.	gene	27202	27387	.	+	.	 gene_name=ORF6
.	.	gene	27394	27759	.	+	.	 gene_name=ORF7a
.	.	gene	27756	27887	.	+	.	 gene_name=ORF7b
.	.	gene	27894	28259	.	+	.	 gene_name=ORF8
.	.	gene	28284	28577	.	+	.	 gene_name=ORF9b
.	.	gene	29558	29674	.	+	.	 gene_name=ORF10
.	.	gene	21563	25384	.	+	.	 gene_name=S