Mercurial > repos > iuc > nonpareil
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nonpareil commit 46f7675fa6e17042965d1a8e5e368ed1c482f08c
author | iuc |
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date | Wed, 27 Jul 2022 09:26:36 +0000 |
parents | 280386b252a5 |
children | cef64c36c89e |
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Nonpareil memory usage ======================= By default, this tool is configured to limit the memory consumption to 1024 Mib. Ideally this value should be larger than the sequences to analyze (discarding non-sequence elements like headers or quality). This is particularly important when running in multiple cores. This value is approximated. Maximum value in this version: 4194303. You can set the NONPAREIL_MAX_MEMORY environmental variable in the destination section of the job_conf.xml file: ``` <?xml version="1.0"?> <!-- A sample job config that explicitly configures job running the way it is configured by default (if there is no explicit config). --> <job_conf> <plugins> <plugin id="local" type="runner" load="galaxy.jobs.runners.local:LocalJobRunner" workers="4"/> </plugins> <handlers> <handler id="main"/> </handlers> <destinations> <destination id="local" runner="local"> <env id="NONPAREIL_MAX_MEMORY">1024</env> </destination> </destinations> </job_conf> ```