Mercurial > repos > iuc > onto_tk_get_ancestor_terms

comparison get_ancestor_terms.xml @ 1:347b617a79c0 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 8564cf195c7700975710c13f900a787e2801bb9d
author iuc
date Fri, 16 Feb 2018 05:57:06 -0500
parents ac306663d53f
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0:ac306663d53f 1:347b617a79c0
1 <tool id="onto_tk_get_ancestor_terms" name="Get the ancestor terms of a given OBO term" version="@VERSION@.0"> 1 <tool id="onto_tk_get_ancestor_terms" name="Get the ancestor terms of a given OBO term" version="@VERSION@.1">
2 <description>Collects the ancestor terms from a given term in the given OBO ontology</description> 2 <description>Collects the ancestor terms from a given term in the given OBO ontology</description>
3 <macros> 3 <macros>
4 <import>onto_macros.xml</import> 4 <import>onto_macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements" /> 6 <expand macro="requirements" />
8 get_ancestor_terms.pl 8 get_ancestor_terms.pl
9 -f '$input' 9 -f '$input'
10 -t '$term_id' > '$output' 10 -t '$term_id' > '$output'
11 </command> 11 </command>
12 <inputs> 12 <inputs>
13 <param format="text" name="input" type="data" label="Source file"/> 13 <expand macro="input_ontology" />
14 <expand macro="term_id" /> 14 <expand macro="term_id" />
15 </inputs> 15 </inputs>
16 <outputs> 16 <outputs>
17 <data format="tabular" name="output"> 17 <data format="tabular" name="output">
18 <actions> 18 <actions>