Mercurial > repos > iuc > onto_tk_obo2owl

comparison onto_macros.xml @ 0:54d363d435f0 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
author iuc
date Fri, 10 Nov 2017 11:31:25 -0500
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-1:000000000000 0:54d363d435f0
1 <macros>
2 <token name="@VERSION@">1.45</token>
3 <xml name="requirements">
4 <requirements>
5 <requirement type="package" version="@VERSION@">perl-onto-perl</requirement>
6 <yield />
7 </requirements>
8 </xml>
9 <xml name="input_ontology">
10 <param name="input" format="obo" type="data" label="Ontology file"/>
11 </xml>
12 <xml name="term_id">
13 <param name="term_id" type="text" value="" label="Term ID">
14 <expand macro="sanitize_ids" />
15 </param>
16 </xml>
17 <xml name="rel_id">
18 <param name="rel_id" type="text" value="" label="Relationship ID">
19 <expand macro="sanitize_ids" />
20 </param>
21 </xml>
22 <xml name="citations">
23 <citations>
24 <citation type="doi">10.1186/1471-2105-11-S12-S8</citation>
25 </citations>
26 </xml>
27 <xml name="sanitize_ids">
28 <sanitizer invalid_char="">
29 <valid initial="string.letters,string.digits"><add value="_" /><add value=":" /> </valid>
30 </sanitizer>
31 </xml>
32 <xml name="sanitize_urls">
33 <sanitizer invalid_char="">
34 <valid initial="string.letters,string.digits"><add value="_" /><add value=":" /><add value="/" /></valid>
35 </sanitizer>
36 </xml>
37 </macros>