Mercurial > repos > iuc > package_atlas_3_10

diff tool_dependencies.xml @ 6:9b900e1578be draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_atlas_3_10 commit c2e47951d0f68e2533e45529ece8a52ab01b9cd2-dirty
author iuc
date Fri, 17 Jun 2016 06:07:19 -0400
parents c0a66ce2a119
children 98c017ec230d
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Jun 16 12:14:27 2016 -0400
+++ b/tool_dependencies.xml	Fri Jun 17 06:07:19 2016 -0400
@@ -48,9 +48,9 @@
                     <action type="shell_command"><![CDATA[
                         cd ATLAS &&
                         mkdir build &&
-                        patch -p1 </host/static_full_blas_lapack.diff &&
-                        patch -p1 </host/shared_libraries.diff &&
-                        patch -p1 </host/cpu-throttling-check.diff &&
+                        patch -p1 < ../atlas_patch-blas-lapack-1.0_src_all.diff &&
+                        patch -p1 < ../atlas_patch-shared-lib-1.0_src_all.diff &&
+                        patch -p1 < ../atlas_patch-cpu-throttle-1.0_src_all.diff &&
                         cd build &&
                         ../configure --prefix="$INSTALL_DIR" -D c -DWALL -b 64 -Fa alg '-fPIC' --with-netlib-lapack-tarfile=../../lapack-3.5.0.tgz -v 2 -t 0 -Si cputhrchk 0 &&
                         make &&