Mercurial > repos > iuc > package_bowtie_2_2_5

diff tool_dependencies.xml @ 0:39c07d717634 draft

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author iuc
date Thu, 14 May 2015 09:37:12 -0400
parents
children 8b300d21e6bd
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu May 14 09:37:12 2015 -0400
@@ -0,0 +1,20 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="bowtie2" version="2.2.5">
+        <install version="1.0">
+            <actions_group>
+                <actions os="linux" architecture="x86_64">
+                    <action type="download_by_url">https://depot.galaxyproject.org/package/linux/x86_64/bowtie2/bowtie2-2.2.5-Linux-x86_64.tar.gz</action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR</destination_directory>
+                    </action>
+                </actions>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions_group>
+        </install>
+        <readme></readme>
+    </package>
+</tool_dependency>