Mercurial > repos > iuc > package_ccat_3_0

annotate tool_dependencies.xml @ 0:1cd7cbbaf3aa draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
author iuc
date Tue, 19 May 2015 14:57:38 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
1 <tool_dependency>
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
2 <package name="CCAT" version="3.0">
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
3 <install version="1.0">
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
4 <actions>
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
5 <action type="download_by_url">http://cmb.gis.a-star.edu.sg/ChIPSeq/tools/CCAT3.0.tar.gz</action>
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
6 <action type="change_directory">src</action>
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
7 <action type="shell_command">./make</action>
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
8 <action type="move_file">
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
9 <source>../bin/CCAT</source>
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
10 <destination>$INSTALL_DIR/bin</destination>
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
11 </action>
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
12
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
13 <action type="set_environment">
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
14 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
15 </action>
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
16 </actions>
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
17 </install>
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
18 <readme>Downloading and compiling CCAT. A Signal-Noise model for significance analysis of ChIP-seq with Negative Control.</readme>
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
19 </package>
1cd7cbbaf3aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ccat_3_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
parents:
diff changeset
20 </tool_dependency>