Mercurial > repos > iuc > package_cummerbund_2_8_2

comparison tool_dependencies.xml @ 4:13c270433440 draft

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author iuc
date Thu, 04 Jun 2015 10:10:58 -0400
parents f18bcdb8c6c5
children 754912f24120
comparison
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3:f18bcdb8c6c5 4:13c270433440
8 </package> 8 </package>
9 <package name="cummeRbund" version="2.8.2"> 9 <package name="cummeRbund" version="2.8.2">
10 <install version="1.0"> 10 <install version="1.0">
11 <actions> 11 <actions>
12 <action type="setup_r_environment"> 12 <action type="setup_r_environment">
13 <repository changeset_revision="8fe20c4f5aff" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
14 <package name="libcurl" version="7.35" />
15 </repository>
13 <repository changeset_revision="6e0eee4ea4e1" name="package_r_3_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 16 <repository changeset_revision="6e0eee4ea4e1" name="package_r_3_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
14 <package name="R" version="3.1.2" /> 17 <package name="R" version="3.1.2" />
15 </repository>
16 <repository changeset_revision="8fe20c4f5aff" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
17 <package name="libcurl" version="7.35" />
18 </repository> 18 </repository>
19 <package>https://depot.galaxyproject.org/package/noarch/DBI_0.3.1.tar.gz</package> 19 <package>https://depot.galaxyproject.org/package/noarch/DBI_0.3.1.tar.gz</package>
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21 <package>https://depot.galaxyproject.org/package/noarch/RCurl_1.95-4.5.tar.gz</package> 21 <package>https://depot.galaxyproject.org/package/noarch/RCurl_1.95-4.5.tar.gz</package>
22 <package>https://depot.galaxyproject.org/package/noarch/XML_3.98-1.1.tar.gz</package> 22 <package>https://depot.galaxyproject.org/package/noarch/XML_3.98-1.1.tar.gz</package>
58 <package>https://depot.galaxyproject.org/package/noarch/acepack_1.3-3.3.tar.gz</package> 58 <package>https://depot.galaxyproject.org/package/noarch/acepack_1.3-3.3.tar.gz</package>
59 <package>https://depot.galaxyproject.org/package/noarch/Hmisc_3.14-6.tar.gz</package> 59 <package>https://depot.galaxyproject.org/package/noarch/Hmisc_3.14-6.tar.gz</package>
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62 <package>https://depot.galaxyproject.org/package/noarch/BiocGenerics_0.12.1.tar.gz</package> 62 <package>https://depot.galaxyproject.org/package/noarch/BiocGenerics_0.12.1.tar.gz</package>
63 <package>http://bioarchive.s3.amazonaws.com/S4Vectors_0.4.0.tar.gz</package> 63 <package>http://bioarchive.galaxyproject.org/S4Vectors_0.4.0.tar.gz</package>
64 <package>https://depot.galaxyproject.org/package/noarch/IRanges_2.0.1.tar.gz</package> 64 <package>https://depot.galaxyproject.org/package/noarch/IRanges_2.0.1.tar.gz</package>
65 <package>https://depot.galaxyproject.org/package/noarch/GenomeInfoDb_1.2.4.tar.gz</package> 65 <package>https://depot.galaxyproject.org/package/noarch/GenomeInfoDb_1.2.4.tar.gz</package>
66 <package>http://bioarchive.s3.amazonaws.com/XVector_0.6.0.tar.gz</package> 66 <package>http://bioarchive.galaxyproject.org/XVector_0.6.0.tar.gz</package>
67 <package>https://depot.galaxyproject.org/package/noarch/GenomicRanges_1.18.3.tar.gz</package> 67 <package>https://depot.galaxyproject.org/package/noarch/GenomicRanges_1.18.3.tar.gz</package>
68 <package>http://bioarchive.s3.amazonaws.com/zlibbioc_1.12.0.tar.gz</package> 68 <package>http://bioarchive.galaxyproject.org/zlibbioc_1.12.0.tar.gz</package>
69 <package>https://depot.galaxyproject.org/package/noarch/Biostrings_2.34.1.tar.gz</package> 69 <package>https://depot.galaxyproject.org/package/noarch/Biostrings_2.34.1.tar.gz</package>
70 <package>https://depot.galaxyproject.org/package/noarch/Rsamtools_1.18.2.tar.gz</package> 70 <package>https://depot.galaxyproject.org/package/noarch/Rsamtools_1.18.2.tar.gz</package>
71 <package>http://bioarchive.s3.amazonaws.com/BiocParallel_1.0.0.tar.gz</package> 71 <package>http://bioarchive.galaxyproject.org/BiocParallel_1.0.0.tar.gz</package>
72 <package>http://bioarchive.s3.amazonaws.com/Biobase_2.26.0.tar.gz</package> 72 <package>http://bioarchive.galaxyproject.org/Biobase_2.26.0.tar.gz</package>
73 <package>https://depot.galaxyproject.org/package/noarch/AnnotationDbi_1.28.1.tar.gz</package> 73 <package>https://depot.galaxyproject.org/package/noarch/AnnotationDbi_1.28.1.tar.gz</package>
74 <package>http://bioarchive.s3.amazonaws.com/biomaRt_2.22.0.tar.gz</package> 74 <package>http://bioarchive.galaxyproject.org/biomaRt_2.22.0.tar.gz</package>
75 <package>https://depot.galaxyproject.org/package/noarch/GenomicAlignments_1.2.1.tar.gz</package> 75 <package>https://depot.galaxyproject.org/package/noarch/GenomicAlignments_1.2.1.tar.gz</package>
76 <package>https://depot.galaxyproject.org/package/noarch/rtracklayer_1.26.2.tar.gz</package> 76 <package>https://depot.galaxyproject.org/package/noarch/rtracklayer_1.26.2.tar.gz</package>
77 <package>https://depot.galaxyproject.org/package/noarch/BSgenome_1.34.1.tar.gz</package> 77 <package>https://bioarchive.galaxyproject.org/BSgenome_1.34.0.tar.gz</package>
78 <package>https://depot.galaxyproject.org/package/noarch/GenomicFeatures_1.18.3.tar.gz</package> 78 <package>https://depot.galaxyproject.org/package/noarch/GenomicFeatures_1.18.3.tar.gz</package>
79 <package>https://depot.galaxyproject.org/package/noarch/VariantAnnotation_1.12.7.tar.gz</package> 79 <package>https://depot.galaxyproject.org/package/noarch/VariantAnnotation_1.12.7.tar.gz</package>
80 <package>https://depot.galaxyproject.org/package/noarch/biovizBase_1.14.1.tar.gz</package> 80 <package>https://depot.galaxyproject.org/package/noarch/biovizBase_1.14.1.tar.gz</package>
81 <package>https://depot.galaxyproject.org/package/noarch/Gviz_1.10.3.tar.gz</package> 81 <package>https://depot.galaxyproject.org/package/noarch/Gviz_1.10.3.tar.gz</package>
82 <package>https://depot.galaxyproject.org/package/noarch/cummeRbund_2.8.2.tar.gz</package> 82 <package>https://depot.galaxyproject.org/package/noarch/cummeRbund_2.8.2.tar.gz</package>