Mercurial > repos > iuc > package_cummerbund_2_8_2
view tool_dependencies.xml @ 2:d9d166e54a21 draft
Download all R libraries from depot.galaxyproject.org
author | devteam |
---|---|
date | Wed, 07 Jan 2015 15:58:28 -0500 |
parents | 271dd1fcbb47 |
children | f18bcdb8c6c5 |
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<?xml version="1.0"?> <tool_dependency> <package name="R" version="3.1.2"> <repository changeset_revision="7cb487a32bde" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> <package name="cummeRbund" version="2.8.2"> <install version="1.0"> <actions> <action type="setup_r_environment"> <repository changeset_revision="7cb487a32bde" name="package_r_3_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> <package name="R" version="3.1.2" /> </repository> <package>https://depot.galaxyproject.org/package/noarch/DBI_0.3.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/bitops_1.0-6.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/RCurl_1.95-4.5.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/XML_3.98-1.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/RSQLite_1.0.0.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/digest_0.6.7.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/Rcpp_0.11.3.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/plyr_1.8.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/gtable_0.1.2.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/proto_0.3-10.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/stringr_0.6.2.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/reshape2_1.4.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/RColorBrewer_1.1-2.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/dichromat_2.0-0.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/labeling_0.3.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/colorspace_1.2-4.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/munsell_0.4.2.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/scales_0.2.4.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/ggplot2_1.0.0.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/fastcluster_1.1.13.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/plyr_1.8.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/getopt_1.20.0.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/rjson_0.2.15.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/findpython_1.0.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/argparse_1.0.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/lattice_0.20-29.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/latticeExtra_0.6-26.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/checkmate_1.5.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/BBmisc_1.8.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/brew_1.0-6.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/fail_1.2.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/base64enc_0.1-2.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/sendmailR_1.2-1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/BatchJobs_1.5.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/iterators_1.0.7.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/codetools_0.2-9.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/foreach_1.4.2.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/Formula_1.1-2.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/survival_2.37-7.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/acepack_1.3-3.3.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/Hmisc_3.14-6.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/R.methodsS3_1.6.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/matrixStats_0.12.2.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/BiocGenerics_0.12.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/S4Vectors_0.4.0.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/IRanges_2.0.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/GenomeInfoDb_1.2.4.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/XVector_0.6.0.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/GenomicRanges_1.18.3.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/zlibbioc_1.12.0.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/Biostrings_2.34.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/Rsamtools_1.18.2.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/BiocParallel_1.0.0.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/Biobase_2.26.0.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/AnnotationDbi_1.28.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/biomaRt_2.22.0.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/GenomicAlignments_1.2.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/rtracklayer_1.26.2.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/BSgenome_1.34.0.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/GenomicFeatures_1.18.3.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/VariantAnnotation_1.12.7.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/biovizBase_1.14.1.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/Gviz_1.10.3.tar.gz</package> <package>https://depot.galaxyproject.org/package/noarch/cummeRbund_2.8.2.tar.gz</package> </action> </actions> </install> <readme> </readme> </package> </tool_dependency>