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Imported from capsule None
author iuc
date Wed, 15 Apr 2015 11:30:18 -0400
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<?xml version="1.0"?>
<tool_dependency>
  <package name="cython" version="0.20.1">
      <repository changeset_revision="c3a8c46fcb97" name="package_cython_0_20_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="cutadapt" version="1.8">
      <install version="1.0">
          <actions>
              <action type="download_by_url">https://pypi.python.org/packages/source/c/cutadapt/cutadapt-1.8.tar.gz</action>
                <action type="set_environment_for_install">
                  <repository changeset_revision="c3a8c46fcb97" name="package_cython_0_20_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                      <package name="cython" version="0.20.1" />
                    </repository>
                </action>
                <action type="shell_command">
                        export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 
                        python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
                    </action>
                <action type="set_environment">
                  <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                    <environment_variable action="set_to" name="CUTADAPT_ROOT_PATH">$INSTALL_DIR</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
        </readme>
    </package>
</tool_dependency>