Mercurial > repos > iuc > package_fastqc_0_11_4

comparison tool_dependencies.xml @ 0:a7f81f2554ad draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_fastqc_0_11_4 commit f5fbc019067477af4a8c340c7d25af4a32563f21
author iuc
date Fri, 15 Jan 2016 10:22:44 -0500
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children a288b8869b7b
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-1:000000000000 0:a7f81f2554ad
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="FastQC" version="0.11.4">
4 <install version="1.0">
5 <actions_group>
6 <actions os="linux" architecture="x86_64">
7 <action type="download_by_url" sha256sum="adb233f9fae7b02fe99e716664502adfec1b9a3fbb84eed4497122d6d33d1fe7">https://depot.galaxyproject.org/software/fastqc/fastqc_0.11.4_linux_all.zip</action>
8 <action type="move_directory_files">
9 <source_directory>../FastQC</source_directory>
10 <destination_directory>$INSTALL_DIR</destination_directory>
11 <action type="shell_command">chmod ugo+x $INSTALL_DIR/fastqc</action>
12 </action>
13 </actions>
14 <actions os="darwin" architecture="x86_64">
15 <action type="download_by_url" sha256sum="bd4089397cfa1086d81e7b29508542d2478917df8d1ef1fb494616da1b8e651a">https://depot.galaxyproject.org/software/fastqc/fastqc_0.11.4_darwin_all.dmg</action>
16 <action type="shell_command">
17 hdiutil attach fastqc_v0.11.4.dmg &amp;&amp;
18 cp -R /Volumes/FastQC/FastQC.app $INSTALL_DIR &amp;&amp;
19 hdiutil detach /Volumes/FastQC
20 </action>
21 <action type="shell_command">chmod ugo+x $INSTALL_DIR/fastqc</action>
22 </actions>
23 <action type="set_environment">
24 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
25 </action>
26 </actions_group>
27 </install>
28 </package>
29 </tool_dependency>