Mercurial > repos > iuc > package_fastqc_0_11_4
view tool_dependencies.xml @ 2:a8f485b2efd9 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_fastqc_0_11_4 commit b'67cff25a50ba173b0468819204d0999496f68ea9'
author | iuc |
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date | Tue, 19 Jan 2016 09:37:46 -0500 |
parents | a288b8869b7b |
children |
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<?xml version="1.0"?> <tool_dependency> <package name="FastQC" version="0.11.4"> <install version="1.0"> <actions_group> <actions os="linux" architecture="x86_64"> <action type="download_by_url" sha256sum="adb233f9fae7b02fe99e716664502adfec1b9a3fbb84eed4497122d6d33d1fe7">https://depot.galaxyproject.org/software/fastqc/fastqc_0.11.4_linux_all.zip</action> <action type="move_directory_files"> <source_directory>../FastQC</source_directory> <destination_directory>$INSTALL_DIR</destination_directory> </action> <action type="chmod"> <file mode="755">$INSTALL_DIR/fastqc</file> </action> <action type="set_environment"> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> <environment_variable name="FASTQC_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable> </action> </actions> <actions os="darwin" architecture="x86_64"> <action type="download_by_url" sha256sum="bd4089397cfa1086d81e7b29508542d2478917df8d1ef1fb494616da1b8e651a">https://depot.galaxyproject.org/software/fastqc/fastqc_0.11.4_darwin_all.dmg</action> <action type="shell_command"> hdiutil attach fastqc_0.11.4_darwin_all.dmg && cp -R /Volumes/FastQC/FastQC.app $INSTALL_DIR && hdiutil detach /Volumes/FastQC </action> <action type="set_environment"> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/FastQC.app/Contents/MacOS</environment_variable> <environment_variable name="FASTQC_JAR_PATH" action="set_to">$INSTALL_DIR/FastQC.app/Contents/MacOS</environment_variable> </action> </actions> </actions_group> </install> </package> </tool_dependency>