Mercurial > repos > iuc > package_hmmer3_1b1

comparison tool_dependencies.xml @ 1:9b9efd1ae42b draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Add PATH prepending.
author iuc
date Thu, 01 Oct 2015 11:08:19 -0400
parents 3c63f4328bef
children
comparison
equal deleted inserted replaced
0:3c63f4328bef 1:9b9efd1ae42b
10 <action type="set_environment"> 10 <action type="set_environment">
11 <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/lib</environment_variable> 11 <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/lib</environment_variable>
12 <environment_variable name="HMMER31_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable> 12 <environment_variable name="HMMER31_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
13 <environment_variable name="C_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/include</environment_variable> 13 <environment_variable name="C_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/include</environment_variable>
14 <environment_variable name="CPLUS_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/include</environment_variable> 14 <environment_variable name="CPLUS_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/include</environment_variable>
15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
15 </action> 16 </action>
16 </actions> 17 </actions>
17 </install> 18 </install>
18 <readme> 19 <readme>
19 HMMER is used for searching sequence databases for homologs of protein 20 HMMER is used for searching sequence databases for homologs of protein
32 were restricted to command line use. To make the software more accessible to 33 were restricted to command line use. To make the software more accessible to
33 the wide scientific community, we now provide servers that allow sequence 34 the wide scientific community, we now provide servers that allow sequence
34 searches to be performed interactively via the Web. 35 searches to be performed interactively via the Web.
35 36
36 http://hmmer.janelia.org/ 37 http://hmmer.janelia.org/
37
38 </readme> 38 </readme>
39 </package> 39 </package>
40 </tool_dependency> 40 </tool_dependency>