Mercurial > repos > iuc > package_macs2_2_1_0

comparison tool_dependencies.xml @ 0:4d7ef54c3fa4 draft default tip

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author iuc
date Wed, 11 Feb 2015 10:17:26 -0500
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-1:000000000000 0:4d7ef54c3fa4
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="numpy" version="1.7.1">
4 <repository changeset_revision="ef12a3a11d5b" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package>
6 <package name="scipy" version="0.12.0">
7 <repository changeset_revision="336aead68607" name="package_scipy_0_12" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package>
9 <!-- 2.1.0.20140616 -->
10 <package name="macs2" version="2.1.0">
11 <install version="1.0">
12 <actions>
13 <action type="download_by_url">https://pypi.python.org/packages/source/M/MACS2/MACS2-2.1.0.20140616.tar.gz</action>
14
15 <action type="set_environment_for_install">
16 <repository changeset_revision="ef12a3a11d5b" name="package_numpy_1_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
17 <package name="numpy" version="1.7.1" />
18 </repository>
19 <repository changeset_revision="336aead68607" name="package_scipy_0_12" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
20 <package name="scipy" version="0.12.0" />
21 </repository>
22 </action>
23 <action type="make_directory">$INSTALL_DIR/lib/python</action>
24 <!-- exporting the CFLAGS and CPPFLAGS are due to http://stackoverflow.com/questions/22313407/clang-error-unknown-argument-mno-fused-madd-python-package-installation-fa -->
25 <action type="shell_command">
26 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
27 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
28 </action>
29 <action type="set_environment">
30 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
31 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
32 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
33 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
34 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_SCIPY]</environment_variable>
35 <environment_variable action="set_to" name="PYTHONPATH_MACS2">$INSTALL_DIR/lib/python</environment_variable>
36 </action>
37 </actions>
38 </install>
39 <readme>Macs2 installation instructions. MACS2 can be found at https://github.com/taoliu/MACS</readme>
40 </package>
41 </tool_dependency>