Mercurial > repos > iuc > package_macs2_2_1_0
comparison tool_dependencies.xml @ 0:4d7ef54c3fa4 draft default tip
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author | iuc |
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date | Wed, 11 Feb 2015 10:17:26 -0500 |
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-1:000000000000 | 0:4d7ef54c3fa4 |
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1 <?xml version="1.0"?> | |
2 <tool_dependency> | |
3 <package name="numpy" version="1.7.1"> | |
4 <repository changeset_revision="ef12a3a11d5b" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> | |
5 </package> | |
6 <package name="scipy" version="0.12.0"> | |
7 <repository changeset_revision="336aead68607" name="package_scipy_0_12" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> | |
8 </package> | |
9 <!-- 2.1.0.20140616 --> | |
10 <package name="macs2" version="2.1.0"> | |
11 <install version="1.0"> | |
12 <actions> | |
13 <action type="download_by_url">https://pypi.python.org/packages/source/M/MACS2/MACS2-2.1.0.20140616.tar.gz</action> | |
14 | |
15 <action type="set_environment_for_install"> | |
16 <repository changeset_revision="ef12a3a11d5b" name="package_numpy_1_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> | |
17 <package name="numpy" version="1.7.1" /> | |
18 </repository> | |
19 <repository changeset_revision="336aead68607" name="package_scipy_0_12" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> | |
20 <package name="scipy" version="0.12.0" /> | |
21 </repository> | |
22 </action> | |
23 <action type="make_directory">$INSTALL_DIR/lib/python</action> | |
24 <!-- exporting the CFLAGS and CPPFLAGS are due to http://stackoverflow.com/questions/22313407/clang-error-unknown-argument-mno-fused-madd-python-package-installation-fa --> | |
25 <action type="shell_command"> | |
26 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python && | |
27 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin | |
28 </action> | |
29 <action type="set_environment"> | |
30 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> | |
31 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable> | |
32 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable> | |
33 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> | |
34 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_SCIPY]</environment_variable> | |
35 <environment_variable action="set_to" name="PYTHONPATH_MACS2">$INSTALL_DIR/lib/python</environment_variable> | |
36 </action> | |
37 </actions> | |
38 </install> | |
39 <readme>Macs2 installation instructions. MACS2 can be found at https://github.com/taoliu/MACS</readme> | |
40 </package> | |
41 </tool_dependency> |