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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_matplotlib_1_2 commit ef70edc74e958c32231f632339da032403d2a55a
author iuc
date Tue, 26 Jan 2016 14:34:47 -0500
parents dddf79f7a6f9
children
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<?xml version="1.0"?>
<tool_dependency>
    <package name="numpy" version="1.7.1">
       <repository changeset_revision="300877695495" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="freetype" version="2.4.11">
        <repository changeset_revision="b32452aa80dc" name="package_freetype_2_4" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="libpng" version="1.6.7">
        <repository changeset_revision="7da8c5e453cc" name="package_libpng_1_6_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="tiff" version="4.0.3">
        <repository changeset_revision="1720cc7e1949" name="package_tiff_4_0_3" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="zlib" version="1.2.8">
        <repository changeset_revision="63a4a902cda2" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="imaging" version="1.1.7">
        <repository changeset_revision="d5f2627f4cfd" name="package_imaging_1_1_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="matplotlib" version="1.2.1">
        <install version="1.0">
            <actions>
                <action sha256sum="52e18972aed85f30b05cef41778ec77685df6012f0598cd216e996de9b9ea29b" type="download_by_url">
                    https://depot.galaxyproject.org/software/matplotlib/matplotlib_1.2.1_src_all.tar.gz
                </action>
                <!-- populate the environment variables from the dependend repos -->
                <action type="set_environment_for_install">
                   <repository changeset_revision="63a4a902cda2" name="package_zlib_1_2_8" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                        <package name="zlib" version="1.2.8" />
                    </repository>
                    <repository changeset_revision="300877695495" name="package_numpy_1_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                        <package name="numpy" version="1.7.1" />
                    </repository>
                    <repository changeset_revision="b32452aa80dc" name="package_freetype_2_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                        <package name="freetype" version="2.4.11" />
                    </repository>
                    <repository changeset_revision="7da8c5e453cc" name="package_libpng_1_6_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                        <package name="libpng" version="1.6.7" />
                    </repository>
                    <repository changeset_revision="1720cc7e1949" name="package_tiff_4_0_3" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                        <package name="tiff" version="4.0.3" />
                    </repository>
                    <repository changeset_revision="d5f2627f4cfd" name="package_imaging_1_1_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                        <package name="imaging" version="1.1.7" />
                    </repository>
                </action>

                <!-- install matplotlib -->
                <action type="make_directory">$INSTALL_DIR/lib/python</action>
                <action type="shell_command">
                    export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
                    python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
                </action>
                <action type="set_environment">
                    <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
                    <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
                    <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_IMAGING]</environment_variable>
                    <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
                    <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[LIBPNG_ROOT]/lib</environment_variable>
                    <environment_variable action="set_to" name="MATPLOTLIB_LIB_PATH">$ENV[LIBPNG_ROOT]/lib</environment_variable>
                    <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[FREETYPE_LIB_DIR]</environment_variable>
                    <environment_variable action="set_to" name="PYTHONPATH_MATPLOTLIB">$INSTALL_DIR/lib/python</environment_variable>
                </action>
            </actions>
        </install>
        <readme>Compiling matplotlib requires a C compiler (typically gcc) and libpng.</readme>
    </package>
</tool_dependency>