Mercurial > repos > iuc > package_meme_4_11_0

annotate tool_dependencies.xml @ 3:5774a0e96d6f draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author iuc
date Mon, 13 Jun 2016 13:13:51 -0400
parents 738dc831aeac
children 74f601c6048c
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
1 <?xml version="1.0"?>
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
2 <tool_dependency>
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
3 <package name="libxslt" version="1.1.28">
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
4 <repository changeset_revision="15c6da429d88" name="package_libxslt_1_1_28" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
5 </package>
2
738dc831aeac planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit ed62467e49a1c586457eebd0220ea585f4de4d1b-dirty
iuc
parents: 1
diff changeset
6 <package name="perl_xml_parser_expat" version="2.41">
738dc831aeac planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit ed62467e49a1c586457eebd0220ea585f4de4d1b-dirty
iuc
parents: 1
diff changeset
7 <repository changeset_revision="1ce3818a8eb9" name="package_perl_xml_parser_expat_2_41" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
1
b7594cd01771 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit ed62467e49a1c586457eebd0220ea585f4de4d1b-dirty
iuc
parents: 0
diff changeset
8 </package>
0
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
9 <package name="meme" version="4.11.0">
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
10 <install version="1.0">
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
11 <actions>
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
12 <action sha256sum="5dc4841f4816ef25bdb4bd088c76606c1b42726e7d65cc417f0f8c49fe7e237f" type="download_by_url">https://depot.galaxyproject.org/software/meme/meme_4.11.0_src_all.tar.gz</action>
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
13 <action type="set_environment_for_install">
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
14 <repository changeset_revision="15c6da429d88" name="package_libxslt_1_1_28" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
15 <package name="libxslt" version="1.1.28" />
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
16 </repository>
2
738dc831aeac planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit ed62467e49a1c586457eebd0220ea585f4de4d1b-dirty
iuc
parents: 1
diff changeset
17 <repository changeset_revision="1ce3818a8eb9" name="package_perl_xml_parser_expat_2_41" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
738dc831aeac planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit ed62467e49a1c586457eebd0220ea585f4de4d1b-dirty
iuc
parents: 1
diff changeset
18 <package name="perl_xml_parser_expat" version="2.41" />
1
b7594cd01771 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit ed62467e49a1c586457eebd0220ea585f4de4d1b-dirty
iuc
parents: 0
diff changeset
19 </repository>
0
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
20 </action>
3
5774a0e96d6f Uploaded
iuc
parents: 2
diff changeset
21 <action type="shell_command">
5774a0e96d6f Uploaded
iuc
parents: 2
diff changeset
22 # Handle this bug: https://groups.google.com/forum/#!topic/meme-suite/rHmLmSt2IiQ
5774a0e96d6f Uploaded
iuc
parents: 2
diff changeset
23 sed -i.bak -e 's|sprintf(evt_string, "%8g", dataset-&gt;evt)|sprintf(evt_string, "%g", dataset-&gt;evt)|' src/display.c
5774a0e96d6f Uploaded
iuc
parents: 2
diff changeset
24 </action>
0
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
25 <action type="autoconf" />
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
26 <action type="set_environment">
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
27 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
3
5774a0e96d6f Uploaded
iuc
parents: 2
diff changeset
28 <environment_variable action="prepend_to" name="PERL5LIB">$ENV[PERL5LIB]</environment_variable>
0
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
29 </action>
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
30 </actions>
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
31 </install>
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
32 <readme>
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
33 </readme>
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
34 </package>
6ee2e1225125 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_0 commit 71ac7e12419b8541746ebf8d4ba704cbbd603db1
iuc
parents:
diff changeset
35 </tool_dependency>