Mercurial > repos > iuc > package_meme_4_11_1

comparison tool_dependencies.xml @ 2:f585fa3ee66b draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/package/package_meme_4_11_1 commit 454df102c5630d90af25d1b9ff8050a6c7b82ffc
author iuc
date Fri, 26 Aug 2016 15:02:06 -0400
parents 336b41a99b8f
children
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1:336b41a99b8f 2:f585fa3ee66b
2 <tool_dependency> 2 <tool_dependency>
3 <package name="graphicsmagick" version="1.3.20"> 3 <package name="graphicsmagick" version="1.3.20">
4 <repository changeset_revision="f2855f4cbc8f" name="package_graphicsmagick_1_3_20" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="f2855f4cbc8f" name="package_graphicsmagick_1_3_20" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="libxslt" version="1.1.28"> 6 <package name="libxslt" version="1.1.28">
7 <repository changeset_revision="d63425547b4c" name="package_libxslt_1_1_28" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="18e2e2ef0f08" name="package_libxslt_1_1_28" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="perl_xml_parser_expat" version="2.41"> 9 <package name="perl_xml_parser_expat" version="2.41">
10 <repository changeset_revision="5d17b1a12107" name="package_perl_xml_parser_expat_2_41" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 10 <repository changeset_revision="5d17b1a12107" name="package_perl_xml_parser_expat_2_41" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
11 </package> 11 </package>
12 <package name="meme" version="4.11.1"> 12 <package name="meme" version="4.11.1">
15 <action sha256sum="62602045b25c8422c59f441025b710629c2fbb602bf618fffeeab5654f521088" type="download_by_url">https://depot.galaxyproject.org/software/meme/meme_4.11.1_src_all.tar.gz</action> 15 <action sha256sum="62602045b25c8422c59f441025b710629c2fbb602bf618fffeeab5654f521088" type="download_by_url">https://depot.galaxyproject.org/software/meme/meme_4.11.1_src_all.tar.gz</action>
16 <action type="set_environment_for_install"> 16 <action type="set_environment_for_install">
17 <repository changeset_revision="f2855f4cbc8f" name="package_graphicsmagick_1_3_20" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 17 <repository changeset_revision="f2855f4cbc8f" name="package_graphicsmagick_1_3_20" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
18 <package name="graphicsmagick" version="1.3.20" /> 18 <package name="graphicsmagick" version="1.3.20" />
19 </repository> 19 </repository>
20 <repository changeset_revision="d63425547b4c" name="package_libxslt_1_1_28" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 20 <repository changeset_revision="18e2e2ef0f08" name="package_libxslt_1_1_28" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
21 <package name="libxslt" version="1.1.28" /> 21 <package name="libxslt" version="1.1.28" />
22 </repository> 22 </repository>
23 <repository changeset_revision="5d17b1a12107" name="package_perl_xml_parser_expat_2_41" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 23 <repository changeset_revision="5d17b1a12107" name="package_perl_xml_parser_expat_2_41" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
24 <package name="perl_xml_parser_expat" version="2.41" /> 24 <package name="perl_xml_parser_expat" version="2.41" />
25 </repository> 25 </repository>
26 </action>
27 <action type="shell_command">
28 # Handle this bug: https://groups.google.com/forum/#!topic/meme-suite/rHmLmSt2IiQ
29 sed -i.bak -e 's|sprintf(evt_string, "%8g", dataset-&gt;evt)|sprintf(evt_string, "%g", dataset-&gt;evt)|' src/display.c
30 </action> 26 </action>
31 <action type="autoconf" /> 27 <action type="autoconf" />
32 <action type="set_environment"> 28 <action type="set_environment">
33 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> 29 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
34 <environment_variable action="prepend_to" name="PERL5LIB">$ENV[PERL5LIB]</environment_variable> 30 <environment_variable action="prepend_to" name="PERL5LIB">$ENV[PERL5LIB]</environment_variable>