Mercurial > repos > iuc > package_ngs_sdk_1_2_3

annotate tool_dependencies.xml @ 0:3da0f4d34e92 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
author iuc
date Tue, 17 May 2016 14:13:49 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
1 <?xml version="1.0"?>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
2 <tool_dependency>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
3 <package name="perl" version="5.18.1">
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
4 <repository changeset_revision="35f117d7396b" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
5 </package>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
6 <package name="ngs_sdk" version="1.2.3">
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
7 <install version="1.0">
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
8 <actions>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
9 <action sha256sum="625ec04737dea787f3800744f1d5fddb4d83b21013c281bcbc8691149b230794" target_filename="ngs-1.2.3.tar.gz" type="download_by_url">https://github.com/ncbi/ngs/archive/1.2.3.tar.gz</action>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
10 <action type="set_environment_for_install">
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
11 <repository changeset_revision="35f117d7396b" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
12 <package name="perl" version="5.18.1" />
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
13 </repository>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
14 </action>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
15 <action type="change_directory">ngs-sdk</action>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
16 <action type="autoconf">--build=$INSTALL_DIR</action>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
17 <action type="set_environment">
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
18 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
19 <environment_variable action="set_to" name="NGS_SDK_DIR">$INSTALL_DIR</environment_variable>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
20 </action>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
21 </actions>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
22 </install>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
23 <readme>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
24 ncbi-ngs-sdk, required for sra-tools package.
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
25
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
26 </readme>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
27 </package>
3da0f4d34e92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
iuc
parents:
diff changeset
28 </tool_dependency>