Mercurial > repos > iuc > package_ngs_sdk_1_2_3

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ngs_sdk_1_2_3 commit 4defaa3ff1c21e2ec39033bfe63ee69471104ede
author iuc
date Tue, 17 May 2016 14:13:49 -0400
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<?xml version="1.0"?>
<tool_dependency>
    <package name="perl" version="5.18.1">
        <repository changeset_revision="35f117d7396b" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="ngs_sdk" version="1.2.3">
        <install version="1.0">
            <actions>
                <action sha256sum="625ec04737dea787f3800744f1d5fddb4d83b21013c281bcbc8691149b230794" target_filename="ngs-1.2.3.tar.gz" type="download_by_url">https://github.com/ncbi/ngs/archive/1.2.3.tar.gz</action>
                <action type="set_environment_for_install">
                    <repository changeset_revision="35f117d7396b" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                        <package name="perl" version="5.18.1" />
                    </repository>
                </action>
                <action type="change_directory">ngs-sdk</action>
                <action type="autoconf">--build=$INSTALL_DIR</action>
                <action type="set_environment">
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                    <environment_variable action="set_to" name="NGS_SDK_DIR">$INSTALL_DIR</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
            ncbi-ngs-sdk, required for sra-tools package.

        </readme>
    </package>
</tool_dependency>