Mercurial > repos > iuc > package_python_2_7

comparison tool_dependencies.xml @ 1:997181c8671c draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
author iuc
date Fri, 17 Jul 2015 10:47:57 -0400
parents 44bb4258922f
children 5caf592bb259
comparison
equal deleted inserted replaced
0:44bb4258922f 1:997181c8671c
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="zlib" version="1.2.8"> 3 <package name="zlib" version="1.2.8">
4 <repository changeset_revision="63a4a902cda2" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="63a4a902cda2" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6
7 <package name="readline" version="6.2"> 6 <package name="readline" version="6.2">
8 <repository changeset_revision="052e8df231ac" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="052e8df231ac" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
9 </package> 8 </package>
10
11 <package name="bzlib" version="1.0.6"> 9 <package name="bzlib" version="1.0.6">
12 <repository changeset_revision="f744bc704064" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 10 <repository changeset_revision="c494aad769a8" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
13 </package> 11 </package>
14
15 <package name="xz" version="5.0.5"> 12 <package name="xz" version="5.0.5">
16 <repository changeset_revision="0f72eb330da4" name="package_xz_5_0_5" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 13 <repository changeset_revision="0f72eb330da4" name="package_xz_5_0_5" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
17 </package> 14 </package>
18 15 <!--
19 <package name="openssl" version="1.0.1"> 16 <package name="openssl" version="1.0">
20 <repository changeset_revision="a8db64fce735" name="package_openssl_1_0" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 17 <repository name="package_openssl_1_0" owner="iuc" prior_installation_required="True" />
21 </package> 18 </package>
22 19 -->
23 <package name="sqlite" version="3.8.3"> 20 <package name="sqlite" version="3.8.3">
24 <repository changeset_revision="706b1f3b1fc0" name="package_sqlite_3_8_3" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 21 <repository changeset_revision="706b1f3b1fc0" name="package_sqlite_3_8_3" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
25 </package> 22 </package>
26
27 <package name="gdbm" version="1.11"> 23 <package name="gdbm" version="1.11">
28 <repository changeset_revision="ad3c23208758" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 24 <repository changeset_revision="ed2537bccffc" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
29 </package> 25 </package>
30
31 <package name="ncurses" version="5.9"> 26 <package name="ncurses" version="5.9">
32 <repository changeset_revision="5e1760c773ba" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 27 <repository changeset_revision="5e1760c773ba" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
33 </package> 28 </package>
34
35 <package name="python" version="2.7"> 29 <package name="python" version="2.7">
36 <install version="1.0"> 30 <install version="1.0">
37 <actions> 31 <actions>
38 <action type="download_by_url">https://www.python.org/ftp/python/2.7.7/Python-2.7.7.tgz</action> 32 <action type="download_by_url">https://www.python.org/ftp/python/2.7.10/Python-2.7.10.tgz</action>
39 33
40 <action type="set_environment_for_install"> 34 <action type="set_environment_for_install">
41 <repository changeset_revision="63a4a902cda2" name="package_zlib_1_2_8" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 35 <repository changeset_revision="63a4a902cda2" name="package_zlib_1_2_8" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
42 <package name="zlib" version="1.2.8" /> 36 <package name="zlib" version="1.2.8" />
43 </repository> 37 </repository>
44 <repository changeset_revision="052e8df231ac" name="package_readline_6_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 38 <repository changeset_revision="052e8df231ac" name="package_readline_6_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
45 <package name="readline" version="6.2" /> 39 <package name="readline" version="6.2" />
46 </repository> 40 </repository>
47 <repository changeset_revision="f744bc704064" name="package_bzlib_1_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 41 <repository changeset_revision="c494aad769a8" name="package_bzlib_1_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
48 <package name="bzlib" version="1.0.6" /> 42 <package name="bzlib" version="1.0.6" />
49 </repository> 43 </repository>
50 <repository changeset_revision="0f72eb330da4" name="package_xz_5_0_5" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 44 <repository changeset_revision="0f72eb330da4" name="package_xz_5_0_5" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
51 <package name="xz" version="5.0.5" /> 45 <package name="xz" version="5.0.5" />
52 </repository> 46 </repository>
53 <repository changeset_revision="a8db64fce735" name="package_openssl_1_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
54 <package name="openssl" version="1.0.1" />
55 </repository>
56 <repository changeset_revision="706b1f3b1fc0" name="package_sqlite_3_8_3" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 47 <repository changeset_revision="706b1f3b1fc0" name="package_sqlite_3_8_3" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
57 <package name="sqlite" version="3.8.3" /> 48 <package name="sqlite" version="3.8.3" />
58 </repository> 49 </repository>
59 <repository changeset_revision="ad3c23208758" name="package_gdbm_1_11" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 50 <!--
51 <repository name="package_openssl_1_0" owner="iuc">
52 <package name="openssl" version="1.0" />
53 </repository>
54 -->
55 <repository changeset_revision="ed2537bccffc" name="package_gdbm_1_11" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
60 <package name="gdbm" version="1.11" /> 56 <package name="gdbm" version="1.11" />
61 </repository> 57 </repository>
62 <repository changeset_revision="5e1760c773ba" name="package_ncurses_5_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 58 <repository changeset_revision="5e1760c773ba" name="package_ncurses_5_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
63 <package name="ncurses" version="5.9" /> 59 <package name="ncurses" version="5.9" />
64 </repository> 60 </repository>
65 </action> 61 </action>
62 <!-- by default python is not looking af LD_INCLUDE_PATH and Co. -->
63 <action type="shell_command">sed -i.bak -e "s/if host_platform == 'atheos':/if True:/g" setup.py</action>
66 64
67 <action type="autoconf" /> 65 <action type="autoconf" />
66 <action type="download_file">https://bitbucket.org/pypa/setuptools/get/6.1.tar.bz2</action>
67 <action type="shell_command">tar -xjf 6.1.tar.bz2</action>
68 <action type="change_directory">pypa-setuptools-7ea80190d494</action>
68 69
69 <action type="download_file">https://bitbucket.org/pypa/setuptools/get/5.2.tar.bz2</action> 70 <action type="shell_command">
70 <action type="shell_command">tar -xjf 5.2.tar.bz2</action> 71 export PATH=$PATH:$INSTALL_DIR/bin &amp;&amp;
71 <action type="change_directory">pypa-setuptools-f493e6c4ffd8</action>
72
73 <action type="shell_command">export PATH=$PATH:$INSTALL_DIR/bin &amp;&amp;
74 export PYTHONHOME=$INSTALL_DIR &amp;&amp; 72 export PYTHONHOME=$INSTALL_DIR &amp;&amp;
75 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR &amp;&amp; 73 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR &amp;&amp;
76 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python2.7/site-packages/ &amp;&amp; 74 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python2.7/site-packages/ &amp;&amp;
77 export PKG_CONFIG_PATH=$PKG_CONFIG_PATH:$INSTALL_DIR/lib/pkgconfig &amp;&amp; 75 export PKG_CONFIG_PATH=$PKG_CONFIG_PATH:$INSTALL_DIR/lib/pkgconfig &amp;&amp;
78 $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR</action> 76 $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR
77 </action>
79 <action type="set_environment"> 78 <action type="set_environment">
80 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> 79 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
81 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable> 80 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
82 <environment_variable action="set_to" name="PYTHONHOME">$INSTALL_DIR</environment_variable> 81 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib</environment_variable>
83 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/lib/pkgconfig</environment_variable> 82 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python2.7/site-packages</environment_variable>
83 <environment_variable action="set_to" name="PYTHONHOME">$INSTALL_DIR</environment_variable>
84 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/lib/pkgconfig</environment_variable>
85 <!--
86 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/pkgconfig</environment_variable>
87 <environment_variable action="prepend_to" name="LIBRARY_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/</environment_variable>
88 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/</environment_variable>
89 <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$ENV[OPENSSL_ROOT_DIR]/include/</environment_variable>
90 <environment_variable action="prepend_to" name="CPLUS_INCLUDE_PATH">$ENV[OPENSSL_ROOT_DIR]/include/</environment_variable>
91 -->
84 </action> 92 </action>
85
86
87
88
89 </actions> 93 </actions>
90 </install> 94 </install>
91 95
92 <readme> 96 <readme>
93 The Python programming language version 2.7. 97 The Python programming language version 2.7.