annotate tool_dependencies.xml @ 5:bd7165ea6526 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit 70de720198f2ee531d6720bfd9d8e56a406123a3
author iuc
date Mon, 06 Feb 2017 11:22:01 -0500
parents 0339c4a9b87b
children
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853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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1 <?xml version="1.0"?>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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2 <tool_dependency>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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3 <package name="zlib" version="1.2.8">
5
bd7165ea6526 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit 70de720198f2ee531d6720bfd9d8e56a406123a3
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4 <repository changeset_revision="411985b46ae8" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
0
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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5 </package>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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6 <package name="readline" version="6.3">
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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7 <repository changeset_revision="ca1a9400d4e1" name="package_readline_6_3" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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8 </package>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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9 <package name="bzlib" version="1.0.6">
2
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10 <repository changeset_revision="af4887e1f595" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
0
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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11 </package>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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12 <package name="xz" version="5.0.5">
3
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13 <repository changeset_revision="944f93d45594" name="package_xz_5_0_5" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
0
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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14 </package>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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15 <package name="sqlite" version="3.8.3">
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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16 <repository changeset_revision="c8a5c11cc921" name="package_sqlite_3_8_3" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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17 </package>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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18 <package name="gdbm" version="1.11">
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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19 <repository changeset_revision="ed2537bccffc" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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20 </package>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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21 <package name="ncurses" version="6.0">
5
bd7165ea6526 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit 70de720198f2ee531d6720bfd9d8e56a406123a3
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22 <repository changeset_revision="0efde9889efd" name="package_ncurses_6_0" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
0
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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23 </package>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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24 <package name="python" version="2.7.10">
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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25 <install version="1.0">
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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26 <actions>
5
bd7165ea6526 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit 70de720198f2ee531d6720bfd9d8e56a406123a3
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27 <action sha256sum="eda8ce6eec03e74991abb5384170e7c65fcd7522e409b8e83d7e6372add0f12a" type="download_by_url">https://depot.galaxyproject.org/software/python/python_2.7_src_all.tar.gz</action>
0
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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29 <action type="set_environment_for_install">
5
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30 <repository changeset_revision="411985b46ae8" name="package_zlib_1_2_8" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
0
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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31 <package name="zlib" version="1.2.8" />
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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32 </repository>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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33 <repository changeset_revision="ca1a9400d4e1" name="package_readline_6_3" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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34 <package name="readline" version="6.3" />
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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35 </repository>
2
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36 <repository changeset_revision="af4887e1f595" name="package_bzlib_1_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
0
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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37 <package name="bzlib" version="1.0.6" />
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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38 </repository>
3
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39 <repository changeset_revision="944f93d45594" name="package_xz_5_0_5" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
0
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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40 <package name="xz" version="5.0.5" />
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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41 </repository>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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42 <repository changeset_revision="c8a5c11cc921" name="package_sqlite_3_8_3" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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43 <package name="sqlite" version="3.8.3" />
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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44 </repository>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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45 <repository changeset_revision="ed2537bccffc" name="package_gdbm_1_11" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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46 <package name="gdbm" version="1.11" />
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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47 </repository>
5
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48 <repository changeset_revision="0efde9889efd" name="package_ncurses_6_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
0
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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49 <package name="ncurses" version="6.0" />
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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50 </repository>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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51 </action>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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52 <!-- by default python is not looking af LD_INCLUDE_PATH and Co. -->
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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53 <action type="shell_command">sed -i.bak -e "s/if host_platform == 'atheos':/if True:/g" setup.py</action>
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54 <action type="autoconf">--enable-shared --enable-unicode=ucs4</action>
5
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55 <action sha256sum="7b2a76ec3aeb6dc95ae66eab173e7b46e26436c5ba4ee94744f2360bce493b25" type="download_file">https://bitbucket.org/pypa/setuptools/get/18.2.tar.bz2</action>
0
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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56 <action type="shell_command">tar -xjf 18.2.tar.bz2</action>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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57 <action type="change_directory">pypa-setuptools-1a981f2e5031</action>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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58
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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59 <action type="shell_command">
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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60 export PATH=$PATH:$INSTALL_DIR/bin &amp;&amp;
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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61 export PYTHONHOME=$INSTALL_DIR &amp;&amp;
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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62 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR &amp;&amp;
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63 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python2.7/site-packages/ &amp;&amp;
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64 export PKG_CONFIG_PATH=$PKG_CONFIG_PATH:$INSTALL_DIR/lib/pkgconfig &amp;&amp;
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65 export LD_LIBRARY_PATH=$INSTALL_DIR/lib/:$LD_LIBRARY_PATH &amp;&amp;
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66
0
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67 $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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68 </action>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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69 <action type="set_environment">
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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70 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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71 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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72 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib</environment_variable>
853f2a41e97f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10 commit bfb533859ffc2fe69cb9297118210dd743d01b01-dirty
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73 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python2.7</environment_variable>
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74 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python2.7/site-packages</environment_variable>
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75 <environment_variable action="set_to" name="PYTHONHOME">$INSTALL_DIR</environment_variable>
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76 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/lib/pkgconfig</environment_variable>
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77 <environment_variable action="prepend_to" name="PYTHON_ROOT_DIR">$INSTALL_DIR</environment_variable>
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78 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
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79 <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$INSTALL_DIR/include/python2.7</environment_variable>
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80 <environment_variable action="prepend_to" name="CPLUS_INCLUDE_PATH">$INSTALL_DIR/include/python2.7</environment_variable>
0
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81 </action>
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82 </actions>
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83 </install>
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84
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85 <readme>
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86 The Python programming language version 2.7.10
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87
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88 http://www.python.org
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89 </readme>
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90
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91 </package>
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92 </tool_dependency>