# HG changeset patch # User iuc # Date 1434988100 14400 # Node ID be87f48b0104baa98062e3e5d7c1c67dca1a3f1d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bcbiogff_0_6_2 commit 30d4cb2e85b56355004ad2a0a068787d72796a8e diff -r 000000000000 -r be87f48b0104 tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Mon Jun 22 11:48:20 2015 -0400 @@ -0,0 +1,45 @@ + + + + + + + + + + + + + https://pypi.python.org/packages/source/s/six/six-1.9.0.tar.gz#md5=476881ef4012262dfc8adc645ee786c4 + https://pypi.python.org/packages/source/b/bcbio-gff/bcbio-gff-0.6.2.tar.gz#md5=d5aae8b125cdad4291f15bec20cfb0ef + + + $INSTALL_DIR + $INSTALL_DIR/bin + + + + +bcbio-gff +--------- + +A python library to read and write Generic Feature Format (`GFF`_). +See the `wiki documentation`_ for details on usage. The goal is to +integrate this code in `gffutils`_ and `Biopython`_. + +Installation from `bcbio-gff in pypi`_:: + + pip install bcbio-gff + +This code is freely available for use under the `Biopython license <https://github.com/biopython/biopython/blob/master/LICENSE>`_. + +.. _GFF: http://www.sequenceontology.org/gff3.shtml +.. _wiki documentation: http://biopython.org/wiki/GFF_Parsing +.. _gffutils: https://github.com/daler/gffutils +.. _Biopython: http://biopython.org +.. _bcbio-gff in pypi: https://pypi.python.org/pypi/bcbio-gff + + + + +