Mercurial > repos > iuc > package_r_3_0_2

comparison tool_dependencies.xml @ 1:858a2281c2c5 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_r_3_0_2 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
author iuc
date Fri, 17 Jul 2015 10:51:40 -0400
parents 50f7e1e71271
children
comparison
equal deleted inserted replaced
0:50f7e1e71271 1:858a2281c2c5
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="readline" version="6.2"> 3 <package name="readline" version="6.2">
4 <repository changeset_revision="052e8df231ac" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="052e8df231ac" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="ncurses" version="5.9"> 6 <package name="ncurses" version="5.9">
7 <repository changeset_revision="9ed7af129bd3" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="5e1760c773ba" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="libpng" version="1.6.7"> 9 <package name="libpng" version="1.6.7">
10 <repository changeset_revision="51f77dcf27bd" name="package_libpng_1_6_7" owner="devteam" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" /> 10 <repository changeset_revision="f48b920cae1f" name="package_libpng_1_6_7" owner="devteam" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
11 </package> 11 </package>
12 <package name="R_3_0_2" version="3.0.2"> 12 <package name="R_3_0_2" version="3.0.2">
13 <install version="1.0"> 13 <install version="1.0">
14 <actions> 14 <actions>
15 <action type="download_by_url">http://cran.ms.unimelb.edu.au/src/base/R-3/R-3.0.2.tar.gz</action> 15 <action type="download_by_url">http://cran.ms.unimelb.edu.au/src/base/R-3/R-3.0.2.tar.gz</action>
16 <action type="set_environment_for_install"> 16 <action type="set_environment_for_install">
17 <repository changeset_revision="052e8df231ac" name="package_readline_6_2" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu"> 17 <repository changeset_revision="052e8df231ac" name="package_readline_6_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
18 <package name="readline" version="6.2" /> 18 <package name="readline" version="6.2" />
19 </repository> 19 </repository>
20 <repository changeset_revision="9ed7af129bd3" name="package_ncurses_5_9" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu"> 20 <repository changeset_revision="5e1760c773ba" name="package_ncurses_5_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
21 <package name="ncurses" version="5.9" /> 21 <package name="ncurses" version="5.9" />
22 </repository> 22 </repository>
23 <repository changeset_revision="51f77dcf27bd" name="package_libpng_1_6_7" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu"> 23 <repository changeset_revision="f48b920cae1f" name="package_libpng_1_6_7" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu">
24 <package name="libpng" version="1.6.7" /> 24 <package name="libpng" version="1.6.7" />
25 </repository> 25 </repository>
26 </action> 26 </action>
27 27
28 <action type="shell_command"> 28 <action type="shell_command">
30 </action> 30 </action>
31 31
32 <action type="shell_command">make</action> 32 <action type="shell_command">make</action>
33 <action type="shell_command">make install</action> 33 <action type="shell_command">make install</action>
34 <action type="set_environment"> 34 <action type="set_environment">
35 <environment_variable action="set_to" name="R_HOME">$INSTALL_DIR/lib/R</environment_variable> 35 <environment_variable action="set_to" name="R_HOME">$INSTALL_DIR</environment_variable>
36 <environment_variable action="set_to" name="R_LIBS">$INSTALL_DIR/lib/R/library</environment_variable> 36 <environment_variable action="set_to" name="R_LIBS">$INSTALL_DIR/lib/R/library</environment_variable>
37 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/lib/R/bin</environment_variable> 37 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/lib/R/bin</environment_variable>
38 <environment_variable action="append_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib/R/lib</environment_variable> 38 <environment_variable action="append_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib/R/lib</environment_variable>
39 <environment_variable action="set_to" name="RHOME">$INSTALL_DIR/lib/R</environment_variable> 39 <environment_variable action="set_to" name="RHOME">$INSTALL_DIR/lib/R</environment_variable>
40 <environment_variable action="set_to" name="R_PATH">$INSTALL_DIR/lib/R/bin</environment_variable> 40 <environment_variable action="set_to" name="R_PATH">$INSTALL_DIR/lib/R/bin</environment_variable>