Mercurial > repos > iuc > package_r_3_2_1

comparison tool_dependencies.xml @ 3:d0bf97420fb5 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_r_3_2_1 commit df8f2ed15d7183def0284e034c932b46ef48fd0b
author iuc
date Fri, 04 Dec 2015 12:25:47 -0500
parents 2ce7fd67f394
children d9f7d84125b7
comparison
equal deleted inserted replaced
2:2ce7fd67f394 3:d0bf97420fb5
41 </package> 41 </package>
42 <package name="libpng" version="1.6.7"> 42 <package name="libpng" version="1.6.7">
43 <repository changeset_revision="05df724aefbb" name="package_libpng_1_6_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 43 <repository changeset_revision="05df724aefbb" name="package_libpng_1_6_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
44 </package> 44 </package>
45 <package name="cairo" version="1.12.14"> 45 <package name="cairo" version="1.12.14">
46 <repository changeset_revision="3d4edf152b1b" name="package_cairo_1_12_14" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 46 <repository changeset_revision="0a73735c3161" name="package_cairo_1_12_14" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
47 </package> 47 </package>
48 <package name="pixman" version="0.32.6"> 48 <package name="pixman" version="0.32.6">
49 <repository changeset_revision="06f701aa92e2" name="package_pixman_0_32_6" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 49 <repository changeset_revision="06f701aa92e2" name="package_pixman_0_32_6" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
50 </package> 50 </package>
51 <package name="freetype" version="2.5.2"> 51 <package name="freetype" version="2.5.2">
62 <package name="readline" version="6.3" /> 62 <package name="readline" version="6.3" />
63 </repository> 63 </repository>
64 <repository changeset_revision="05df724aefbb" name="package_libpng_1_6_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"> 64 <repository changeset_revision="05df724aefbb" name="package_libpng_1_6_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
65 <package name="libpng" version="1.6.7" /> 65 <package name="libpng" version="1.6.7" />
66 </repository> 66 </repository>
67 <repository changeset_revision="3d4edf152b1b" name="package_cairo_1_12_14" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"> 67 <repository changeset_revision="0a73735c3161" name="package_cairo_1_12_14" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
68 <package name="cairo" version="1.12.14" /> 68 <package name="cairo" version="1.12.14" />
69 </repository> 69 </repository>
70 <repository changeset_revision="06f701aa92e2" name="package_pixman_0_32_6" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"> 70 <repository changeset_revision="06f701aa92e2" name="package_pixman_0_32_6" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
71 <package name="pixman" version="0.32.6" /> 71 <package name="pixman" version="0.32.6" />
72 </repository> 72 </repository>
78 </repository> 78 </repository>
79 <repository changeset_revision="2ce32675340e" name="package_fontconfig_2_11_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"> 79 <repository changeset_revision="2ce32675340e" name="package_fontconfig_2_11_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
80 <package name="fontconfig" version="2.11.1" /> 80 <package name="fontconfig" version="2.11.1" />
81 </repository> 81 </repository>
82 </action> 82 </action>
83 <action type="autoconf">--with-tcltk --with-blas --with-lapack --with-readline --with-cairo --with-libpng --without-x --enable-R-shlib --disable-R-framework --libdir=$INSTALL_DIR/lib</action> 83 <action type="autoconf">--with-tcltk --with-blas --with-lapack --without-aqua --with-readline --with-cairo --with-libpng --without-x --enable-R-shlib --disable-R-framework --libdir=$INSTALL_DIR/lib</action>
84 <action type="make_install" /> 84 <action type="make_install" />
85 <action type="shell_command">sed -i.bak -e 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/bin/R</action> 85 <action type="shell_command">sed -i.bak -e 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/bin/R</action>
86 <action type="shell_command">sed -i.bak -e 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/lib/R/bin/R</action> 86 <action type="shell_command">sed -i.bak -e 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/lib/R/bin/R</action>
87 </actions> 87 </actions>
88 <action type="set_environment"> 88 <action type="set_environment">