# HG changeset patch
# User iuc
# Date 1409002682 14400
# Node ID 87a27fc31fb5a180dbf3fd02db199145c151cd21

Imported from capsule None

diff -r 000000000000 -r 87a27fc31fb5 tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Mon Aug 25 17:38:02 2014 -0400
@@ -0,0 +1,36 @@
+<?xml version="1.0"?>
+<tool_dependency>
+  <package name="R" version="2.11.0">
+      <repository changeset_revision="5824d2b3bc8b" name="package_r_2_11_0" owner="devteam" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="ggplot2" version="0.9.3">
+      <install version="1.0">
+          <actions>
+              <action type="setup_r_environment">
+                  <repository changeset_revision="5824d2b3bc8b" name="package_r_2_11_0" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu">
+                      <package name="R" version="2.11.0" />
+                    </repository>
+                    <package>https://github.com/bgruening/download_store/raw/master/gatk2_R_deps/colorspace_1.2-4.tar.gz</package>
+                    <package>https://github.com/bgruening/download_store/raw/master/gatk2_R_deps/stringr_0.6.2.tar.gz</package>
+                    <package>https://github.com/bgruening/download_store/raw/master/gatk2_R_deps/RColorBrewer_1.0-5.tar.gz</package>
+                    <package>https://github.com/bgruening/download_store/raw/master/gatk2_R_deps/dichromat_2.0-0.tar.gz</package>
+                    <package>https://github.com/bgruening/download_store/raw/master/gatk2_R_deps/munsell_0.4.2.tar.gz</package>
+                    <package>https://github.com/bgruening/download_store/raw/master/gatk2_R_deps/labeling_0.2.tar.gz</package>
+                    <package>https://github.com/bgruening/download_store/raw/master/gatk2_R_deps/plyr_1.8.1.tar.gz</package>
+                    <package>https://github.com/bgruening/download_store/raw/master/gatk2_R_deps/digest_0.6.4.tar.gz</package>
+                    <package>https://github.com/bgruening/download_store/raw/master/gatk2_R_deps/gtable_0.1.2.tar.gz</package>
+                    <package>https://github.com/bgruening/download_store/raw/master/gatk2_R_deps/reshape2_1.2.2.tar.gz</package>
+                    <package>https://github.com/bgruening/download_store/raw/master/gatk2_R_deps/scales_0.2.3.tar.gz</package>
+                    <package>https://github.com/bgruening/download_store/raw/master/gatk2_R_deps/proto_0.3-10.tar.gz</package>
+                    <package>https://github.com/bgruening/download_store/raw/master/gatk2_R_deps/ggplot2_0.9.3.1.tar.gz</package>
+                </action>
+            </actions>
+        </install>
+        <readme>
+            ggplot2 is a plotting system for R, based on the grammar of graphics, which tries to take the good parts of base and lattice graphics and none of the bad parts. 
+            It takes care of many of the fiddly details that make plotting a hassle (like drawing legends) as well as providing a powerful model of graphics that makes it easy to produce complex multi-layered graphics.
+
+            http://ggplot2.org/
+        </readme>
+    </package>
+</tool_dependency>