# HG changeset patch
# User Jim Johnson <jj@umn.edu>
# Date 1412341156 18000
# Node ID 0bce36ee6bf2318a4b730672cd63f692ae255ca8
# Parent  aad4e1a162c55683685032ec969ea92b2d7e9efb
Edit tpp_gui.pl to change from CGI deprecated endform to end_form

diff -r aad4e1a162c5 -r 0bce36ee6bf2 tool_dependencies.xml
--- a/tool_dependencies.xml	Thu Jun 05 19:27:54 2014 -0400
+++ b/tool_dependencies.xml	Fri Oct 03 07:59:16 2014 -0500
@@ -41,6 +41,9 @@
                 <action type="download_file">https://dl.dropbox.com/u/226794/TPP-4.6.3.tgz</action>
                 <action type="shell_command">tar -zxf TPP-4.6.3.tgz</action>
 
+                <!-- Change deprecated CGI endform to end_form -->
+                <action type="shell_command">sed -i.orig 's/endform/end_form/' TPP-4.6.3/trans_proteomic_pipeline/CGI/tpp_gui/tpp_gui.pl</action>
+
                 <action type="change_directory">./TPP-4.6.3/trans_proteomic_pipeline/src/</action>
                 <action type="shell_command">echo 'TPP_ROOT=$INSTALL_DIR/tpp/' &gt; Makefile.config.incl</action>
                 <action type="shell_command">echo 'TPP_WEB=/tpp/' &gt;&gt; Makefile.config.incl</action>