Mercurial > repos > iuc > package_transdecoder_2_0_1

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
author iuc
date Fri, 20 Nov 2015 06:48:47 -0500
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1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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1 <?xml version="1.0"?>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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2 <tool_dependency>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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3 <package name="transdecoder" version="2.0.1">
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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4 <install version="1.0">
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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5 <actions>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
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6 <action type="download_by_url" sha256sum="ce069da72c8a04e739f8c057af4f97187bf587d3f0d3db40465dfc2c89393e22">https://github.com/TransDecoder/TransDecoder/archive/2.0.1.tar.gz</action>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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7 <action type="shell_command">make</action>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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8 <action type="move_file">
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
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9 <source>TransDecoder.LongOrfs</source>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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10 <destination>$INSTALL_DIR</destination>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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11 </action>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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12 <action type="move_file">
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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13 <source>TransDecoder.Predict</source>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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14 <destination>$INSTALL_DIR</destination>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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15 </action>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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16 <action type="move_directory_files">
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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17 <source_directory>PerlLib</source_directory>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
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18 <destination_directory>$INSTALL_DIR/PerlLib</destination_directory>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
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19 </action>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
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20 <action type="move_directory_files">
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
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21 <source_directory>util</source_directory>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
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22 <destination_directory>$INSTALL_DIR/util</destination_directory>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
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23 </action>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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24 <action type="set_environment">
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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25 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/</environment_variable>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
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26 </action>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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27 </actions>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
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28 </install>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
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29 </package>
1fb9f6beb8fb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
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30 </tool_dependency>