Mercurial > repos > iuc > package_trinity_2_1_1

comparison tool_dependencies.xml @ 1:6bbb95b43f62 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_trinity_2_1_1 commit a7154599629e0f552495d91166648c3398acc10e
author iuc
date Mon, 25 Apr 2016 11:43:03 -0400
parents b66b28a11557
children 26c668666989
comparison
equal deleted inserted replaced
0:b66b28a11557 1:6bbb95b43f62
108 </package> 108 </package>
109 <package sha256sum="0f67391d3fd6bc970293b5eb11dcd14f15686b61bce1c6da03e16dc3a60e93f2"> 109 <package sha256sum="0f67391d3fd6bc970293b5eb11dcd14f15686b61bce1c6da03e16dc3a60e93f2">
110 https://depot.galaxyproject.org/software/ctc/ctc_1.44.0_src_all.tar.gz 110 https://depot.galaxyproject.org/software/ctc/ctc_1.44.0_src_all.tar.gz
111 </package> 111 </package>
112 <package sha256sum="f16b6316fdbd7ab0077644d41a3286a688b0b75cc34686383e10f139f0955ae1"> 112 <package sha256sum="f16b6316fdbd7ab0077644d41a3286a688b0b75cc34686383e10f139f0955ae1">
113 https://depot.galaxyproject.org/software/biobase/biobase_2.30.0_src_all.tar.gz 113 https://depot.galaxyproject.org/software/Biobase/Biobase_2.30.0_src_all.tar.gz
114 </package> 114 </package>
115 </action> 115 </action>
116 116
117 <action type="shell_command">sed -i.bak -e 's/-ltinfo//' trinity-plugins/Makefile</action> <!-- tinfo is included in ncurses lib--> 117 <action type="shell_command">sed -i.bak -e 's/-ltinfo//' trinity-plugins/Makefile</action> <!-- tinfo is included in ncurses lib-->
118 <action type="shell_command">sed -i.bak -e '/tar xvf samtools-0.1.19.tar.bz2/a \\tsed -i.bak -e "s|-lcurses|-lncurses|" samtools-0.1.19/Makefile samtools-0.1.19/Makefile' trinity-plugins/Makefile</action> <!-- ncurses instead of curses --> 118 <action type="shell_command">sed -i.bak -e '/tar xvf samtools-0.1.19.tar.bz2/a \\tsed -i.bak -e "s|-lcurses|-lncurses|" samtools-0.1.19/Makefile samtools-0.1.19/Makefile' trinity-plugins/Makefile</action> <!-- ncurses instead of curses -->