Mercurial > repos > iuc > package_ucsc_tools_312

changeset 0:2d6bafd63401 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
author iuc
date Thu, 11 Jun 2015 16:02:14 -0400
parents
children
files tool_dependencies.xml
diffstat 1 files changed, 30 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Jun 11 16:02:14 2015 -0400
@@ -0,0 +1,30 @@
+<?xml version='1.0' encoding='utf-8'?>
+<tool_dependency>
+    <package name="ucsc_tools" version="312">
+        <install version="1.0">
+            <actions_group>
+                <actions architecture="x86_64" os="linux">
+                    <action type="download_by_url">https://depot.galaxyproject.org/package/linux/x86_64/ucsc/ucsc-312-Linux-x86_64.tar.gz</action>
+                    <action type="shell_command">rm ucsc-312-Linux-x86_64.tar.gz</action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR</destination_directory>
+                    </action>
+                </actions>
+                <!--actions architecture="x86_64" os="darwin">
+                    <action type="download_by_url"></action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
+                    </action>
+                </actions-->
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                    <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/lib</environment_variable>
+                    <environment_variable name="UCSC_TOOLS_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
+                </action>
+            </actions_group>
+         </install>
+         <readme>The well known UCSC tools from Jim Kent.</readme>
+     </package>
+</tool_dependency>