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annotate macros.xml @ 0:68413c5eb035 draft

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planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
author iuc
date Tue, 26 Mar 2024 12:49:21 +0000
parents
children 44cb74c154bc
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68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
1 <macros>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
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2 <token name="@TOOL_VERSION@">1.0.3</token>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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3 <token name="@SUFFIX_VERSION@">0</token>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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4 <xml name="edam_ontology">
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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5 <edam_datas>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
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6 <edam_data>topic_1381</edam_data>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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7 </edam_datas>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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8 </xml>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
9 <xml name="requirements">
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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10 <requirements>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
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11 <requirement type="package" version="@TOOL_VERSION@">pairtools</requirement>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
12 </requirements>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
13 </xml>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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14 <xml name="creator">
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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15 <creator>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
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16 <organization name="IZW" url="https://www.izw-berlin.de/en/home.html"/>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
17 </creator>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
18 </xml>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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19 <xml name="citations">
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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20 <citations>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
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21 <citation type="doi">10.1101/2023.02.13.528389</citation>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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22 </citations>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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23 </xml>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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24 <xml name="walks_policy_options">
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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25 <option value="mask">mask - Mask walks (chrom="!", pos=0, strand="-")</option>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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26 <option value="5any">5any - Report the 5'-most alignment on each side</option>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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27 <option value="5unique" selected="true">5unique - Report the 5'-most unique alignment on each side, if present</option>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
28 <option value="3any">3any - Report the 3'-most alignment on each side</option>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
29 <option value="3unique">3unique - Report the 3'-most unique alignment on each side, if present</option>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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30 <option value="all">all - Report all available unique alignments on each side</option>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
31 </xml>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
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32 </macros>