Mercurial > repos > iuc > pairtools_parse

comparison test-data/output_parsed_pairs.stats @ 0:68413c5eb035 draft

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planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
author iuc
date Tue, 26 Mar 2024 12:49:21 +0000
parents
children 44cb74c154bc
comparison
equal deleted inserted replaced
-1:000000000000 0:68413c5eb035
1 total 592
2 total_unmapped 53
3 total_single_sided_mapped 231
4 total_mapped 308
5 total_dups 0
6 total_nodups 308
7 cis 308
8 trans 0
9 pair_types/MU 88
10 pair_types/UU 293
11 pair_types/MM 49
12 pair_types/UR 8
13 pair_types/MR 26
14 pair_types/NR 110
15 pair_types/RU 7
16 pair_types/nM 3
17 pair_types/Mu 7
18 pair_types/NM 1
19 cis_1kb+ 15
20 cis_2kb+ 14
21 cis_4kb+ 14
22 cis_10kb+ 12
23 cis_20kb+ 9
24 cis_40kb+ 9
25 summary/frac_cis 1.0
26 summary/frac_cis_1kb+ 0.048701298701298704
27 summary/frac_cis_2kb+ 0.045454545454545456
28 summary/frac_cis_4kb+ 0.045454545454545456
29 summary/frac_cis_10kb+ 0.03896103896103896
30 summary/frac_cis_20kb+ 0.02922077922077922
31 summary/frac_cis_40kb+ 0.02922077922077922
32 summary/frac_dups 0.0
33 summary/complexity_naive nan
34 chrom_freq/Test_seq/Test_seq 308
35 dist_freq/0-1/+- 0
36 dist_freq/0-1/-+ 0
37 dist_freq/0-1/-- 0
38 dist_freq/0-1/++ 0
39 dist_freq/1-2/+- 0
40 dist_freq/1-2/-+ 0
41 dist_freq/1-2/-- 0
42 dist_freq/1-2/++ 0
43 dist_freq/2-3/+- 0
44 dist_freq/2-3/-+ 0
45 dist_freq/2-3/-- 0
46 dist_freq/2-3/++ 0
47 dist_freq/3-6/+- 0
48 dist_freq/3-6/-+ 0
49 dist_freq/3-6/-- 0
50 dist_freq/3-6/++ 0
51 dist_freq/6-10/+- 0
52 dist_freq/6-10/-+ 0
53 dist_freq/6-10/-- 0
54 dist_freq/6-10/++ 0
55 dist_freq/10-18/+- 0
56 dist_freq/10-18/-+ 0
57 dist_freq/10-18/-- 0
58 dist_freq/10-18/++ 0
59 dist_freq/18-32/+- 0
60 dist_freq/18-32/-+ 0
61 dist_freq/18-32/-- 0
62 dist_freq/18-32/++ 0
63 dist_freq/32-56/+- 0
64 dist_freq/32-56/-+ 0
65 dist_freq/32-56/-- 0
66 dist_freq/32-56/++ 0
67 dist_freq/56-100/+- 1
68 dist_freq/56-100/-+ 0
69 dist_freq/56-100/-- 0
70 dist_freq/56-100/++ 0
71 dist_freq/100-178/+- 3
72 dist_freq/100-178/-+ 0
73 dist_freq/100-178/-- 0
74 dist_freq/100-178/++ 0
75 dist_freq/178-316/+- 53
76 dist_freq/178-316/-+ 0
77 dist_freq/178-316/-- 0
78 dist_freq/178-316/++ 0
79 dist_freq/316-562/+- 236
80 dist_freq/316-562/-+ 0
81 dist_freq/316-562/-- 0
82 dist_freq/316-562/++ 0
83 dist_freq/562-1000/+- 0
84 dist_freq/562-1000/-+ 0
85 dist_freq/562-1000/-- 0
86 dist_freq/562-1000/++ 0
87 dist_freq/1000-1778/+- 1
88 dist_freq/1000-1778/-+ 0
89 dist_freq/1000-1778/-- 0
90 dist_freq/1000-1778/++ 0
91 dist_freq/1778-3162/+- 0
92 dist_freq/1778-3162/-+ 0
93 dist_freq/1778-3162/-- 0
94 dist_freq/1778-3162/++ 0
95 dist_freq/3162-5623/+- 0
96 dist_freq/3162-5623/-+ 0
97 dist_freq/3162-5623/-- 0
98 dist_freq/3162-5623/++ 0
99 dist_freq/5623-10000/+- 2
100 dist_freq/5623-10000/-+ 0
101 dist_freq/5623-10000/-- 0
102 dist_freq/5623-10000/++ 0
103 dist_freq/10000-17783/+- 1
104 dist_freq/10000-17783/-+ 1
105 dist_freq/10000-17783/-- 0
106 dist_freq/10000-17783/++ 0
107 dist_freq/17783-31623/+- 1
108 dist_freq/17783-31623/-+ 0
109 dist_freq/17783-31623/-- 0
110 dist_freq/17783-31623/++ 0
111 dist_freq/31623-56234/+- 0
112 dist_freq/31623-56234/-+ 0
113 dist_freq/31623-56234/-- 0
114 dist_freq/31623-56234/++ 1
115 dist_freq/56234-100000/+- 2
116 dist_freq/56234-100000/-+ 0
117 dist_freq/56234-100000/-- 1
118 dist_freq/56234-100000/++ 1
119 dist_freq/100000-177828/+- 1
120 dist_freq/100000-177828/-+ 0
121 dist_freq/100000-177828/-- 1
122 dist_freq/100000-177828/++ 2
123 dist_freq/177828-316228/+- 0
124 dist_freq/177828-316228/-+ 0
125 dist_freq/177828-316228/-- 0
126 dist_freq/177828-316228/++ 0
127 dist_freq/316228-562341/+- 0
128 dist_freq/316228-562341/-+ 0
129 dist_freq/316228-562341/-- 0
130 dist_freq/316228-562341/++ 0
131 dist_freq/562341-1000000/+- 0
132 dist_freq/562341-1000000/-+ 0
133 dist_freq/562341-1000000/-- 0
134 dist_freq/562341-1000000/++ 0
135 dist_freq/1000000-1778279/+- 0
136 dist_freq/1000000-1778279/-+ 0
137 dist_freq/1000000-1778279/-- 0
138 dist_freq/1000000-1778279/++ 0
139 dist_freq/1778279-3162278/+- 0
140 dist_freq/1778279-3162278/-+ 0
141 dist_freq/1778279-3162278/-- 0
142 dist_freq/1778279-3162278/++ 0
143 dist_freq/3162278-5623413/+- 0
144 dist_freq/3162278-5623413/-+ 0
145 dist_freq/3162278-5623413/-- 0
146 dist_freq/3162278-5623413/++ 0
147 dist_freq/5623413-10000000/+- 0
148 dist_freq/5623413-10000000/-+ 0
149 dist_freq/5623413-10000000/-- 0
150 dist_freq/5623413-10000000/++ 0
151 dist_freq/10000000-17782794/+- 0
152 dist_freq/10000000-17782794/-+ 0
153 dist_freq/10000000-17782794/-- 0
154 dist_freq/10000000-17782794/++ 0
155 dist_freq/17782794-31622777/+- 0
156 dist_freq/17782794-31622777/-+ 0
157 dist_freq/17782794-31622777/-- 0
158 dist_freq/17782794-31622777/++ 0
159 dist_freq/31622777-56234133/+- 0
160 dist_freq/31622777-56234133/-+ 0
161 dist_freq/31622777-56234133/-- 0
162 dist_freq/31622777-56234133/++ 0
163 dist_freq/56234133-100000000/+- 0
164 dist_freq/56234133-100000000/-+ 0
165 dist_freq/56234133-100000000/-- 0
166 dist_freq/56234133-100000000/++ 0
167 dist_freq/100000000-177827941/+- 0
168 dist_freq/100000000-177827941/-+ 0
169 dist_freq/100000000-177827941/-- 0
170 dist_freq/100000000-177827941/++ 0
171 dist_freq/177827941-316227766/+- 0
172 dist_freq/177827941-316227766/-+ 0
173 dist_freq/177827941-316227766/-- 0
174 dist_freq/177827941-316227766/++ 0
175 dist_freq/316227766-562341325/+- 0
176 dist_freq/316227766-562341325/-+ 0
177 dist_freq/316227766-562341325/-- 0
178 dist_freq/316227766-562341325/++ 0
179 dist_freq/562341325-1000000000/+- 0
180 dist_freq/562341325-1000000000/-+ 0
181 dist_freq/562341325-1000000000/-- 0
182 dist_freq/562341325-1000000000/++ 0
183 dist_freq/562341325+/+- 0
184 dist_freq/562341325+/-+ 0
185 dist_freq/562341325+/-- 0
186 dist_freq/562341325+/++ 0