Mercurial > repos > iuc > pairtools_parse
diff test-data/pairs_output_yaml.stats @ 5:a98caf2d8309 draft
planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
| author | iuc |
|---|---|
| date | Fri, 05 Apr 2024 10:33:52 +0000 |
| parents | |
| children | 44cb74c154bc |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/pairs_output_yaml.stats Fri Apr 05 10:33:52 2024 +0000 @@ -0,0 +1,195 @@ +no_filter: + total: 592 + total_unmapped: 4 + total_single_sided_mapped: 147 + total_mapped: 441 + total_dups: 0 + total_nodups: 441 + cis: 441 + trans: 0 + pair_types: + UU: 405 + NR: 119 + MU: 21 + UR: 19 + RU: 17 + MR: 6 + MM: 4 + NU: 1 + cis_1kb+: 75 + cis_2kb+: 72 + cis_4kb+: 70 + cis_10kb+: 67 + cis_20kb+: 61 + cis_40kb+: 61 + summary: + frac_cis: 1.0 + frac_cis_1kb+: 0.17006802721088435 + frac_cis_2kb+: 0.16326530612244897 + frac_cis_4kb+: 0.15873015873015872 + frac_cis_10kb+: 0.15192743764172337 + frac_cis_20kb+: 0.1383219954648526 + frac_cis_40kb+: 0.1383219954648526 + frac_dups: 0.0 + complexity_naive: .nan + chrom_freq: + Test_seq/Test_seq: 441 + dist_freq: + +-: + 0: 0 + 1: 0 + 2: 0 + 3: 0 + 6: 0 + 10: 0 + 18: 0 + 32: 7 + 56: 9 + 100: 5 + 178: 60 + 316: 284 + 562: 1 + 1000: 1 + 1778: 1 + 3162: 0 + 5623: 2 + 10000: 2 + 17783: 1 + 31623: 0 + 56234: 3 + 100000: 3 + 177828: 4 + 316228: 0 + 562341: 0 + 1000000: 0 + 1778279: 0 + 3162278: 0 + 5623413: 0 + 10000000: 0 + 17782794: 0 + 31622777: 0 + 56234133: 0 + 100000000: 0 + 177827941: 0 + 316227766: 0 + 562341325: 0 + 1000000000: 0 + -+: + 0: 0 + 1: 0 + 2: 0 + 3: 0 + 6: 0 + 10: 0 + 18: 0 + 32: 0 + 56: 0 + 100: 0 + 178: 0 + 316: 0 + 562: 0 + 1000: 0 + 1778: 0 + 3162: 0 + 5623: 0 + 10000: 2 + 17783: 0 + 31623: 1 + 56234: 0 + 100000: 3 + 177828: 0 + 316228: 1 + 562341: 0 + 1000000: 0 + 1778279: 0 + 3162278: 0 + 5623413: 0 + 10000000: 0 + 17782794: 0 + 31622777: 0 + 56234133: 0 + 100000000: 0 + 177827941: 0 + 316227766: 0 + 562341325: 0 + 1000000000: 0 + --: + 0: 0 + 1: 0 + 2: 0 + 3: 0 + 6: 0 + 10: 0 + 18: 0 + 32: 0 + 56: 0 + 100: 0 + 178: 0 + 316: 0 + 562: 0 + 1000: 1 + 1778: 1 + 3162: 0 + 5623: 0 + 10000: 0 + 17783: 0 + 31623: 21 + 56234: 1 + 100000: 2 + 177828: 0 + 316228: 0 + 562341: 0 + 1000000: 0 + 1778279: 0 + 3162278: 0 + 5623413: 0 + 10000000: 0 + 17782794: 0 + 31622777: 0 + 56234133: 0 + 100000000: 0 + 177827941: 0 + 316227766: 0 + 562341325: 0 + 1000000000: 0 + ++: + 0: 0 + 1: 0 + 2: 0 + 3: 0 + 6: 0 + 10: 0 + 18: 0 + 32: 0 + 56: 0 + 100: 0 + 178: 0 + 316: 0 + 562: 0 + 1000: 0 + 1778: 1 + 3162: 0 + 5623: 1 + 10000: 1 + 17783: 0 + 31623: 10 + 56234: 3 + 100000: 7 + 177828: 2 + 316228: 0 + 562341: 0 + 1000000: 0 + 1778279: 0 + 3162278: 0 + 5623413: 0 + 10000000: 0 + 17782794: 0 + 31622777: 0 + 56234133: 0 + 100000000: 0 + 177827941: 0 + 316227766: 0 + 562341325: 0 + 1000000000: 0 + chromsizes: + Test_seq: 450060