# HG changeset patch # User iuc # Date 1753451641 0 # Node ID 729197476fc17ccb7f890b2d60c083ab2d5a1fc2 # Parent 2131d908a798e02c93a5a2436e9faed3d55dbb57 planemo upload for repository https://github.com/open2c/pairtools commit 365c6f6387b2f90af22a62e673873b90e7f7394a diff -r 2131d908a798 -r 729197476fc1 parse.xml --- a/parse.xml Fri Jun 27 20:32:33 2025 +0000 +++ b/parse.xml Fri Jul 25 13:54:01 2025 +0000 @@ -1,4 +1,4 @@ - + Find ligation pairs in alignments and create pairs. macros.xml @@ -21,6 +21,9 @@ #if $output_stats: '$parsed_pairs_stats' #end if + #if $select_add_columns.add_columns_selection == "yes": + --add-columns '$select_add_columns.add_columns' + #end if --walks-policy '$walks_policy' --max-inter-align-gap '$max_inter_algn_gap' --nproc-in \${GALAXY_SLOTS:-4} @@ -36,6 +39,31 @@ + + + + + + + + + + + + + + + + + + + + + + + + + @@ -43,7 +71,7 @@ - + output_stats @@ -124,6 +152,19 @@ + + + + + + + + + + + + +